ENSDARG00000055722


Danio rerio

Features
Gene ID: ENSDARG00000055722
  
Biological name :bco2a
  
Synonyms : bco2a / beta-carotene oxygenase 2a
  
Possible biological names infered from orthology : BCO2 / Beta,beta-carotene 9,10-oxygenase / beta-carotene oxygenase 2 / Q99NF1 / Q9BYV7
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 30052714
Gene end: 30080332
  
Corresponding Affymetrix probe sets: Dr.7080.1.A1_at (Zebrafish Array)   Dr.7080.1.A1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000120758
Ensembl peptide - ENSDARP00000138644
Ensembl peptide - ENSDARP00000113898
NCBI entrez gene - 793849     See in Manteia.
swissprot - A0A0R4IQ01
swissprot - F1QBA0
swissprot - F1QU45
ZFIN ID - ZDB-GENE-030131-8039
Ensembl - ENSDARG00000055722
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BCO2ENSGALG00000007868Gallus gallus
 BCO2ENSG00000197580Homo sapiens
 Bco2ENSMUSG00000032066Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bco2b / beta-carotene oxygenase 2b / BCO2* / Q99NF1* / Q9BYV7* / beta-carotene oxygenase 2* / Beta,beta-carotene 9,10-oxygenase *ENSDARG0000004171566
bco2l / beta-carotene 15, 15-dioxygenase 2, like / BCO2* / Q9BYV7* / Q99NF1* / beta-carotene oxygenase 2* / Beta,beta-carotene 9,10-oxygenase *ENSDARG0000002762057
bco1l / beta-carotene oxygenase 1, like / BCO1* / Q9HAY6* / Q9JJS6* / beta-carotene oxygenase 1* / Beta,beta-carotene 15,15-dioxygenase *ENSDARG0000010365939
bco1 / beta-carotene oxygenase 1 / Q9HAY6* / Q9JJS6* / Beta,beta-carotene 15,15-dioxygenase *ENSDARG0000010425637
A9C3R8 / rpe65c / retinal pigment epithelium-specific protein 65c / RPE65* / Q91ZQ5* / Q16518* / Retinoid isomerohydrolase * / RPE65, retinoid isomerohydrolase*ENSDARG0000005442034
A9C3R9 / rpe65b / retinal pigment epithelium-specific protein 65b / RPE65* / Q91ZQ5* / Q16518* / Retinoid isomerohydrolase * / RPE65, retinoid isomerohydrolase*ENSDARG0000009475234
rpe65a / Q6PBW5 / retinal pigment epithelium-specific protein 65a / RPE65* / Q16518* / RPE65, retinoid isomerohydrolase*ENSDARG0000000748031


Protein motifs (from Interpro)
Interpro ID Name
 IPR004294  Carotenoid oxygenase
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr