ENSDARG00000094752


Danio rerio

Features
Gene ID: ENSDARG00000094752
  
Biological name :rpe65b
  
Synonyms : A9C3R9 / retinal pigment epithelium-specific protein 65b / rpe65b
  
Possible biological names infered from orthology : Q16518 / Q91ZQ5 / Retinoid isomerohydrolase / RPE65 / RPE65, retinoid isomerohydrolase
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 16688370
Gene end: 16697912
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000144903
Ensembl peptide - ENSDARP00000071014
NCBI entrez gene - 100002865     See in Manteia.
RefSeq - NM_001089433
RefSeq Peptide - NP_001082902
swissprot - A9C3R9
ZFIN ID - ZDB-GENE-050410-16
Ensembl - ENSDARG00000094752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPE65ENSGALG00000011259Gallus gallus
 RPE65ENSG00000116745Homo sapiens
 Rpe65ENSMUSG00000028174Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A9C3R8 / rpe65c / retinal pigment epithelium-specific protein 65c / RPE65* / Q91ZQ5* / Q16518* / Retinoid isomerohydrolase * / RPE65, retinoid isomerohydrolase*ENSDARG0000005442096
rpe65a / Q6PBW5 / retinal pigment epithelium-specific protein 65a / RPE65* / Q16518* / RPE65, retinoid isomerohydrolase*ENSDARG0000000748077
bco2a / beta-carotene oxygenase 2a / BCO2* / Q99NF1* / Q9BYV7* / beta-carotene oxygenase 2* / Beta,beta-carotene 9,10-oxygenase *ENSDARG0000005572236
bco2l / beta-carotene 15, 15-dioxygenase 2, like / BCO2* / Q9BYV7* / Q99NF1* / beta-carotene oxygenase 2* / Beta,beta-carotene 9,10-oxygenase *ENSDARG0000002762035
bco1l / beta-carotene oxygenase 1, like / BCO1* / Q9HAY6* / Q9JJS6* / beta-carotene oxygenase 1* / Beta,beta-carotene 15,15-dioxygenase *ENSDARG0000010365935
bco2b / beta-carotene oxygenase 2b / BCO2* / Q99NF1* / Q9BYV7* / beta-carotene oxygenase 2* / Beta,beta-carotene 9,10-oxygenase *ENSDARG0000004171534
bco1 / beta-carotene oxygenase 1 / Q9HAY6* / Q9JJS6* / Beta,beta-carotene 15,15-dioxygenase *ENSDARG0000010425633


Protein motifs (from Interpro)
Interpro ID Name
 IPR004294  Carotenoid oxygenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
The canonical retinoid cycle in rods (twilight vision)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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