Manteia

ENSGALG00000006822

Gallus gallus

Features

Gene ID:	ENSGALG00000006822

Biological name :	PCDH19

Synonyms :	PCDH19 / protocadherin-19 precursor

Possible biological names infered from orthology :	protocadherin 19 / Q80TF3 / Q8TAB3

Species:	Gallus gallus

Chr. number:	4
Strand:	1
Band:
Gene start:	5247920
Gene end:	5296040

Corresponding Affymetrix probe sets:	Gga.2405.1.S1_at (Chicken Array)

Cross references:	Ensembl peptide - ENSGALP00000038966 NCBI entrez gene - 422263 See in Manteia. RefSeq - NM_001098607 RefSeq - XM_015278277 RefSeq - XM_015278278 RefSeq Peptide - NP_001092077 swissprot - F1NER2 Ensembl - ENSGALG00000006822

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
pcdh19	ENSDARG00000034344	Danio rerio
PCDH19	ENSG00000165194	Homo sapiens
Pcdh19	ENSMUSG00000051323	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
PCDH17 / protocadherin 17 / O14917*	ENSGALG00000016941	51
PCDH18 / protocadherin 18 / Q8VHR0* / Q9HCL0*	ENSGALG00000009732	36
PCDH8 / protocadherin-8 precursor / O95206* / Q7TSK3* / protocadherin 8*	ENSGALG00000036258	31
PCDH12 / protocadherin 12 / O55134* / Q9NPG4*	ENSGALG00000002544	30
PCDHGC3 / Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA.	ENSGALG00000028565	27
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000029700	25
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000041601	25
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000041947	25
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000036159	24
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000041306	24
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000041692	24
Q9Y5E8* / PCDHB15* / protocadherin beta 15*	ENSGALG00000044463	24
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000042230	22

Protein motifs (from Interpro)

Interpro ID	Name
IPR002126	Cadherin
IPR013164	Cadherin, N-terminal
IPR015919	Cadherin-like
IPR020894	Cadherin conserved site
IPR030716	Protocadherin-19

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007155	cell adhesion	IBA
biological_process	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	IEA
biological_process	GO:0007267	cell-cell signaling	IBA
biological_process	GO:0007399	nervous system development	IBA
biological_process	GO:0007420	brain development	IEA
cellular_component	GO:0005886	plasma membrane	IEA
cellular_component	GO:0005887	integral component of plasma membrane	IBA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
molecular_function	GO:0005509	calcium ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2025 contact: otassy@igbmc.fr