Manteia

ENSGALG00000009732

Gallus gallus

Features

Gene ID:	ENSGALG00000009732

Biological name :	PCDH18

Synonyms :	PCDH18 / protocadherin 18

Possible biological names infered from orthology :	Q8VHR0 / Q9HCL0

Species:	Gallus gallus

Chr. number:	4
Strand:	-1
Band:
Gene start:	28880217
Gene end:	28890136

Corresponding Affymetrix probe sets:	GgaAffx.23025.1.S1_at (Chicken Array) GgaAffx.6111.1.S1_at (Chicken Array)

Cross references:	Ensembl peptide - ENSGALP00000045217 Ensembl peptide - ENSGALP00000015825 NCBI entrez gene - 422438 See in Manteia. RefSeq - XM_420404 RefSeq - XM_004940935 swissprot - F1NWI1 swissprot - A0A1D5NXW4 Ensembl - ENSGALG00000009732

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
pcdh18a	ENSDARG00000089805	Danio rerio
pcdh18b	ENSDARG00000052494	Danio rerio
PCDH18	ENSG00000189184	Homo sapiens
Pcdh18	ENSMUSG00000037892	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
PCDH17 / protocadherin 17 / O14917*	ENSGALG00000016941	35
PCDH19 / protocadherin-19 precursor / Q80TF3* / Q8TAB3* / protocadherin 19*	ENSGALG00000006822	34
PCDH8 / protocadherin-8 precursor / O95206* / Q7TSK3* / protocadherin 8*	ENSGALG00000036258	34
PCDH12 / protocadherin 12 / O55134* / Q9NPG4*	ENSGALG00000002544	33
PCDHGC3 / Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA.	ENSGALG00000028565	26
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000041601	23
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000041947	23
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000029700	22
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000036159	22
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000041692	22
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000041306	21
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...	ENSGALG00000042230	21
Q9Y5E8* / PCDHB15* / protocadherin beta 15*	ENSGALG00000044463	21

Protein motifs (from Interpro)

Interpro ID	Name
IPR002126	Cadherin
IPR013164	Cadherin, N-terminal
IPR015919	Cadherin-like
IPR020894	Cadherin conserved site
IPR030714	Protocadherin-18

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007155	cell adhesion	IEA
biological_process	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	IEA
biological_process	GO:0007267	cell-cell signaling	IBA
biological_process	GO:0007399	nervous system development	IEA
biological_process	GO:0007420	brain development	IEA
cellular_component	GO:0005886	plasma membrane	IEA
cellular_component	GO:0005887	integral component of plasma membrane	IBA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
molecular_function	GO:0005509	calcium ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2025 contact: otassy@igbmc.fr