ENSGALG00000026836


Gallus gallus

Features
Gene ID: ENSGALG00000026836
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : COL16A1 / Collagen alpha-1(XVI) chain / collagen type XVI alpha 1 chain / Q07092 / Q8BLX7
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 4983358
Gene end: 4985730
  
Corresponding Affymetrix probe sets: GgaAffx.2037.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043411
swissprot - R4GME9
Ensembl - ENSGALG00000026836
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 col16a1ENSDARG00000009194Danio rerio
 Q07092ENSG00000084636Homo sapiens
 Q8BLX7ENSMUSG00000040690Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL4A5 / collagen type IV alpha 5 chain / P29400* / collagen, type IV, alpha 5*ENSGALG0000000814136
COL22A1 / collagen alpha-1(XXII) chain precursor / Q8NFW1* / collagen, type XXII, alpha 1* / collagen type XXII alpha 1 chain*ENSGALG0000003802236
COL4A6 / collagen type IV alpha 6 chain / Q14031* / collagen, type IV, alpha 6*ENSGALG0000000826635
COL4A2 / collagen, type IV, alpha 2 precursor / P08122* / P08572* / collagen type IV alpha 2 chain* / Collagen alpha-2(IV) chain Canstatin*ENSGALG0000001684335
COL4A1 / collagen type IV alpha 1 chain / P02462* / P02463* / Collagen alpha-1(IV) chain Arresten*ENSGALG0000003679835
COL19A1 / collagen type XIX alpha 1 chain / Q0VF58* / Q14993* / Collagen alpha-1(XIX) chain *ENSGALG0000004358433
COL4A3 / collagen type IV alpha 3 chain / Q01955* / Q9QZS0* / Collagen alpha-3(IV) chain Tumstatin*ENSGALG0000003861232
COL21A1 / collagen type XXI alpha 1 chain / Q96P44*ENSGALG0000001629219
COL4A4* / P53420* / Q9QZR9* / Collagen alpha-4(IV) chain * / collagen type IV alpha 4 chain*ENSGALG0000000494611
COL4A4* / P53420* / Q9QZR9* / Collagen alpha-4(IV) chain * / collagen type IV alpha 4 chain*ENSGALG000000431753


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes
Integrin cell surface interactions
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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