ENSGALG00000038022


Gallus gallus

Features
Gene ID: ENSGALG00000038022
  
Biological name :COL22A1
  
Synonyms : COL22A1 / collagen alpha-1(XXII) chain precursor
  
Possible biological names infered from orthology : collagen, type XXII, alpha 1 / collagen type XXII alpha 1 chain / Q8NFW1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 144646756
Gene end: 144875068
  
Corresponding Affymetrix probe sets: Gga.10972.1.S1_at (Chicken Array)   GgaAffx.10349.1.S1_s_at (Chicken Array)   GgaAffx.10349.2.S1_x_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058114
NCBI entrez gene - 420315     See in Manteia.
RefSeq - NM_001139439
RefSeq - XM_015283174
RefSeq Peptide - NP_001132911
swissprot - A0A1D5PYQ9
Ensembl - ENSGALG00000038022
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8NFW1ENSG00000169436Homo sapiens
 Col22a1ENSMUSG00000079022Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL4A5 / collagen type IV alpha 5 chain / P29400* / collagen, type IV, alpha 5*ENSGALG0000000814134
COL4A1 / collagen type IV alpha 1 chain / P02462* / P02463* / Collagen alpha-1(IV) chain Arresten*ENSGALG0000003679833
COL4A2 / collagen, type IV, alpha 2 precursor / P08122* / P08572* / collagen type IV alpha 2 chain* / Collagen alpha-2(IV) chain Canstatin*ENSGALG0000001684331
COL4A6 / collagen type IV alpha 6 chain / Q14031* / collagen, type IV, alpha 6*ENSGALG0000000826630
COL4A3 / collagen type IV alpha 3 chain / Q01955* / Q9QZS0* / Collagen alpha-3(IV) chain Tumstatin*ENSGALG0000003861230
COL4A4* / P53420* / Q9QZR9* / Collagen alpha-4(IV) chain * / collagen type IV alpha 4 chain*ENSGALG0000000494627
COL19A1 / collagen type XIX alpha 1 chain / Q0VF58* / Q14993* / Collagen alpha-1(XIX) chain *ENSGALG0000004358426
COL21A1 / collagen type XXI alpha 1 chain / Q96P44*ENSGALG0000001629216
Q07092* / Q8BLX7* / COL16A1* / Collagen alpha-1(XVI) chain * / collagen type XVI alpha 1 chain*ENSGALG000000268368
COL4A4* / P53420* / Q9QZR9* / Collagen alpha-4(IV) chain * / collagen type IV alpha 4 chain*ENSGALG000000431751


Protein motifs (from Interpro)
Interpro ID Name
 IPR001791  Laminin G domain
 IPR002035  von Willebrand factor, type A
 IPR008160  Collagen triple helix repeat
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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