ENSGALG00000043584


Gallus gallus

Features
Gene ID: ENSGALG00000043584
  
Biological name :COL19A1
  
Synonyms : COL19A1 / collagen type XIX alpha 1 chain
  
Possible biological names infered from orthology : Collagen alpha-1(XIX) chain / Q0VF58 / Q14993
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 83179142
Gene end: 83351003
  
Corresponding Affymetrix probe sets: Gga.10924.1.S1_at (Chicken Array)   GgaAffx.10182.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051714
NCBI entrez gene - 421873     See in Manteia.
RefSeq - XM_004940448
RefSeq - XM_004940449
RefSeq - XM_004940450
RefSeq - XM_015284806
RefSeq - XM_419890
RefSeq - XM_004940447
swissprot - A0A1D5PFZ7
Ensembl - ENSGALG00000043584
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q14993ENSG00000082293Homo sapiens
 Q0VF58ENSMUSG00000026141Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL4A5 / collagen type IV alpha 5 chain / P29400* / collagen, type IV, alpha 5*ENSGALG0000000814138
COL22A1 / collagen alpha-1(XXII) chain precursor / Q8NFW1* / collagen, type XXII, alpha 1* / collagen type XXII alpha 1 chain*ENSGALG0000003802238
COL4A1 / collagen type IV alpha 1 chain / P02462* / P02463* / Collagen alpha-1(IV) chain Arresten*ENSGALG0000003679835
COL4A6 / collagen type IV alpha 6 chain / Q14031* / collagen, type IV, alpha 6*ENSGALG0000000826633
COL4A2 / collagen, type IV, alpha 2 precursor / P08122* / P08572* / collagen type IV alpha 2 chain* / Collagen alpha-2(IV) chain Canstatin*ENSGALG0000001684332
COL4A3 / collagen type IV alpha 3 chain / Q01955* / Q9QZS0* / Collagen alpha-3(IV) chain Tumstatin*ENSGALG0000003861232
COL4A4* / P53420* / Q9QZR9* / Collagen alpha-4(IV) chain * / collagen type IV alpha 4 chain*ENSGALG0000000494626
COL21A1 / collagen type XXI alpha 1 chain / Q96P44*ENSGALG0000001629219
Q07092* / Q8BLX7* / COL16A1* / Collagen alpha-1(XVI) chain * / collagen type XVI alpha 1 chain*ENSGALG0000002683611
COL4A4* / P53420* / Q9QZR9* / Collagen alpha-4(IV) chain * / collagen type IV alpha 4 chain*ENSGALG000000431751


Protein motifs (from Interpro)
Interpro ID Name
 IPR001791  Laminin G domain
 IPR008160  Collagen triple helix repeat
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007519 skeletal muscle tissue development IEA
 biological_processGO:0030198 extracellular matrix organization IEA


Pathways (from Reactome)
Pathway description
Collagen degradation
Collagen biosynthesis and modifying enzymes
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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