ENSGALG00000034907


Gallus gallus

Features
Gene ID: ENSGALG00000034907
  
Biological name :HOXB5
  
Synonyms : HOXB5
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 27
Strand: 1
Band:
Gene start: 3818138
Gene end: 3820558
  
Corresponding Affymetrix probe sets: GgaAffx.1913.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048616
NCBI entrez gene - 425096     See in Manteia.
RefSeq - NM_001025355
RefSeq Peptide - NP_001020526
swissprot - Q5I188
Ensembl - ENSGALG00000034907
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hoxb5aENSDARG00000013057Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXA5 / Q6B3N0 / Homeobox protein Hox-A5 / P09021* / P20719* / homeobox A5*ENSGALG0000002592955
HOXD4 / homeobox D4 / P09016* / P10628* / Homeobox protein Hox-D4 *ENSGALG0000002341934
HOXC5* / Q00444* / P32043* / AC012531.3* / homeobox C5* / Homeobox protein Hox-C5 *ENSGALG0000003041634
HOXA6* / HOXB6* / P09023* / P09092* / P17509* / P31267* / homeobox B6* / homeobox A6* / Homeobox protein Hox-B6 * / Homeobox protein Hox-A6 *ENSGALG0000003761934
HOXA7 / Q90VZ9 / Homeobox protein Hox-A7 / P02830* / P31268* / homeobox A7*ENSGALG0000002698933
HOXA6 / Q5YLH5 / Homeobox protein Hox-A6 ENSGALG0000002890833
HOXB4 / P14840 / Homeobox protein Hox-B4 / P10284* / P17483* / homeobox B4*ENSGALG0000000028432
HOXC4 / homeobox C4 / P09017* / Q08624*ENSGALG0000003553932
HOXA4 / P17277 / Homeobox protein Hox-A4 / Q00056* / homeobox A4*ENSGALG0000002262231
HOXB7 / homeobox B7 / P09024* / P09629* / Homeobox protein Hox-B7 *ENSGALG0000003274031
HOXC8 / Q9YH13 / Homeobox protein Hox-C8 / P09025* / P31273* / homeobox C8*ENSGALG0000003726228
HOXC6 / homeobox C6 / P09630* / P10629* / Homeobox protein Hox-C6 *ENSGALG0000003905128
HOXB8 / homeobox B8 / P09632* / P17481* / Homeobox protein Hox-B8 *ENSGALG0000004032028
CDX1 / Q9DEB6 / Homeobox protein CDX-1 / P18111* / P47902* / caudal type homeobox 1*ENSGALG0000000567924
HOXD8 / P23459 / Homeobox protein Hox-D8 / P13378* / P23463* / homeobox D8*ENSGALG0000003727224
CDX4* / O14627* / Q07424* / caudal type homeobox 4* / Homeobox protein CDX-4 *ENSGALG0000000765623
CDX4 / O14627* / Q07424* / caudal type homeobox 4* / Homeobox protein CDX-4 *ENSGALG0000000765723
CDX2 / homeobox protein CDX-2 / P43241* / Q99626* / caudal type homeobox 2*ENSGALG0000003498323


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR001827  Homeobox protein, antennapedia type, conserved site
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR017995  Homeobox protein, antennapedia type
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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