ENSMUSG00000016995


Mus musculus

Features
Gene ID: ENSMUSG00000016995
  
Biological name :Matn4
  
Synonyms : Matn4 / matrilin 4
  
Possible biological names infered from orthology : O95460
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: H3
Gene start: 164389393
Gene end: 164405160
  
Corresponding Affymetrix probe sets: 10489471 (MoGene1.0st)   1418464_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000099392
Ensembl peptide - ENSMUSP00000099393
Ensembl peptide - ENSMUSP00000104982
Ensembl peptide - ENSMUSP00000104983
NCBI entrez gene - 17183     See in Manteia.
MGI - MGI:1328314
RefSeq - XM_011239331
RefSeq - NM_001252563
RefSeq - NM_013592
RefSeq Peptide - NP_038620
RefSeq Peptide - NP_001239492
swissprot - F2Z3U4
swissprot - F2Z469
swissprot - F2Z468
Ensembl - ENSMUSG00000016995
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 matn4ENSDARG00000015947Danio rerio
 ENSGALG00000004028Gallus gallus
 MATN4ENSG00000124159Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Matn2 / O08746 / Mus musculus matrilin 2 (Matn2), transcript variant 1, mRNA. / O00339* / matrilin 2*ENSMUSG0000002232450
Matn1 / P51942 / Cartilage matrix protein / P21941* / matrilin 1, cartilage matrix protein*ENSMUSG0000004053340
Matn3 / O35701 / Matrilin-3 / O15232*ENSMUSG0000002058330
Q6NZL8 / Scube1 / signal peptide, CUB domain, EGF-like 1 / Q8IWY4* / signal peptide, CUB domain and EGF like domain containing 1*ENSMUSG0000001676316
Q66PY1 / Scube3 / Signal peptide, CUB and EGF-like domain-containing protein 3 / Q8IX30* / signal peptide, CUB domain and EGF like domain containing 3*ENSMUSG0000003867716
Q9JJS0 / Scube2 / Signal peptide, CUB and EGF-like domain-containing protein 2 / Q9NQ36* / signal peptide, CUB domain and EGF like domain containing 2*ENSMUSG0000000727915
Cd93 / O89103 / Complement component C1q receptor / Q9NPY3* / CD93 molecule*ENSMUSG0000002743515
Vwa1 / Q8R2Z5 / von Willebrand factor A domain containing 1 / Q6PCB0*ENSMUSG0000004211615
Cd248 / Q91V98 / Endosialin / Q9HCU0* / CD248 molecule*ENSMUSG0000005648113
Thbd / P15306 / thrombomodulin / P07204*ENSMUSG0000007474311
Q8VCP9 / Clec14a / C-type lectin domain family 14 member A / Q86T13* / C-type lectin domain containing 14A*ENSMUSG000000459307


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002035  von Willebrand factor, type A
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR019466  Matrilin, coiled-coil trimerisation domain
 IPR034306  Matrilin-4
 IPR036337  Matrilin, coiled-coil domain superfamily
 IPR036465  von Willebrand factor A-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr