ENSDARG00000002609


Danio rerio

Features
Gene ID: ENSDARG00000002609
  
Biological name :rnf145a
  
Synonyms : ring finger protein 145a / rnf145a
  
Possible biological names infered from orthology : Q5SWK7 / Q96MT1 / ring finger protein 145 / RNF145
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 34966598
Gene end: 35012162
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000002111
Ensembl peptide - ENSDARP00000153841
NCBI entrez gene - 565986     See in Manteia.
swissprot - E7FA30
ZFIN ID - ZDB-GENE-111012-3
Ensembl - ENSDARG00000002609
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF145ENSGALG00000003691Gallus gallus
 Q96MT1ENSG00000145860Homo sapiens
 Q5SWK7ENSMUSG00000019189Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf145b / ring finger protein 145b / Q5SWK7* / Q96MT1* / RNF145* / ring finger protein 145*ENSDARG0000003237385
zmp:0000000662ENSDARG0000005682951
rnf139 / ring finger protein 139 / Q8WU17*ENSDARG0000003692924
syvn1 / synovial apoptosis inhibitor 1, synoviolin / Q86TM6* / synoviolin 1*ENSDARG0000001784213
amfra / autocrine motility factor receptor a / AMFR* / Q9UKV5* / Q9R049* / E3 ubiquitin-protein ligase AMFR * / autocrine motility factor receptor*ENSDARG0000002021812
amfrb / autocrine motility factor receptor b / AMFR* / Q9UKV5* / Q9R049* / E3 ubiquitin-protein ligase AMFR * / autocrine motility factor receptor*ENSDARG0000010557810


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR025754  TRC8 N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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