ENSDARG00000032373


Danio rerio

Features
Gene ID: ENSDARG00000032373
  
Biological name :rnf145b
  
Synonyms : ring finger protein 145b / rnf145b
  
Possible biological names infered from orthology : Q5SWK7 / Q96MT1 / ring finger protein 145 / RNF145
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 34001712
Gene end: 34032650
  
Corresponding Affymetrix probe sets: Dr.734.1.S1_at (Zebrafish Array)   NM_199763_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120329
Ensembl peptide - ENSDARP00000047514
NCBI entrez gene - 327056     See in Manteia.
RefSeq - NM_199763
RefSeq Peptide - NP_956057
swissprot - F1QRE1
swissprot - F1QC99
ZFIN ID - ZDB-GENE-030131-5264
Ensembl - ENSDARG00000032373
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF145ENSGALG00000003691Gallus gallus
 Q96MT1ENSG00000145860Homo sapiens
 Q5SWK7ENSMUSG00000019189Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf145a / ring finger protein 145a / Q5SWK7* / Q96MT1* / RNF145* / ring finger protein 145*ENSDARG0000000260980
zmp:0000000662ENSDARG0000005682949
rnf139 / ring finger protein 139 / Q8WU17*ENSDARG0000003692923
syvn1 / synovial apoptosis inhibitor 1, synoviolin / Q86TM6* / synoviolin 1*ENSDARG0000001784213
amfra / autocrine motility factor receptor a / AMFR* / Q9UKV5* / Q9R049* / E3 ubiquitin-protein ligase AMFR * / autocrine motility factor receptor*ENSDARG0000002021812
amfrb / autocrine motility factor receptor b / AMFR* / Q9UKV5* / Q9R049* / E3 ubiquitin-protein ligase AMFR * / autocrine motility factor receptor*ENSDARG0000010557810


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR025754  TRC8 N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr