ENSDARG00000105578


Danio rerio

Features
Gene ID: ENSDARG00000105578
  
Biological name :amfrb
  
Synonyms : amfrb / autocrine motility factor receptor b
  
Possible biological names infered from orthology : AMFR / autocrine motility factor receptor / E3 ubiquitin-protein ligase AMFR / Q9R049 / Q9UKV5
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 35245607
Gene end: 35271142
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142688
Ensembl peptide - ENSDARP00000150664
NCBI entrez gene - 101884807     See in Manteia.
swissprot - A0A1D5NS78
ZFIN ID - ZDB-GENE-130530-643
Ensembl - ENSDARG00000105578
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AMFRENSGALG00000003107Gallus gallus
 AMFRENSG00000159461Homo sapiens
 AmfrENSMUSG00000031751Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
amfra / autocrine motility factor receptor a / AMFR* / Q9UKV5* / Q9R049* / E3 ubiquitin-protein ligase AMFR * / autocrine motility factor receptor*ENSDARG0000002021849
syvn1 / synovial apoptosis inhibitor 1, synoviolin / Q86TM6* / synoviolin 1*ENSDARG0000001784219
rnf145b / ring finger protein 145b / Q5SWK7* / Q96MT1* / RNF145* / ring finger protein 145*ENSDARG0000003237315
rnf145a / ring finger protein 145a / Q5SWK7* / Q96MT1* / RNF145* / ring finger protein 145*ENSDARG0000000260915
zmp:0000000662ENSDARG0000005682914
rnf139 / ring finger protein 139 / Q8WU17*ENSDARG0000003692914


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
ER Quality Control Compartment (ERQC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr