ENSDARG00000056829


Danio rerio

Features
Gene ID: ENSDARG00000056829
  
Biological name :zmp:0000000662
  
Synonyms : zmp:0000000662
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 11767603
Gene end: 11800281
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073848
NCBI entrez gene - 100002825     See in Manteia.
swissprot - E7F675
ZFIN ID - ZDB-GENE-130530-665
Ensembl - ENSDARG00000056829
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf145b / ring finger protein 145b / Q5SWK7* / Q96MT1* / RNF145* / ring finger protein 145*ENSDARG0000003237348
rnf145a / ring finger protein 145a / Q5SWK7* / Q96MT1* / RNF145* / ring finger protein 145*ENSDARG0000000260947
rnf139 / ring finger protein 139 / Q8WU17*ENSDARG0000003692924
syvn1 / synovial apoptosis inhibitor 1, synoviolin / Q86TM6* / synoviolin 1*ENSDARG0000001784211
amfra / autocrine motility factor receptor a / AMFR* / Q9UKV5* / Q9R049* / E3 ubiquitin-protein ligase AMFR * / autocrine motility factor receptor*ENSDARG0000002021811
amfrb / autocrine motility factor receptor b / AMFR* / Q9UKV5* / Q9R049* / E3 ubiquitin-protein ligase AMFR * / autocrine motility factor receptor*ENSDARG000001055789


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR025754  TRC8 N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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