ENSDARG00000008127


Danio rerio

Features
Gene ID: ENSDARG00000008127
  
Biological name :pcdh15b
  
Synonyms : pcdh15b / protocadherin-related 15b
  
Possible biological names infered from orthology : PCDH15 / Protocadherin-15 / protocadherin related 15 / Q96QU1 / Q99PJ1
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 6566233
Gene end: 6905375
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097169
Ensembl peptide - ENSDARP00000141906
Ensembl peptide - ENSDARP00000126943
NCBI entrez gene - 503521     See in Manteia.
RefSeq - NM_001012486
RefSeq Peptide - NP_001012504
swissprot - A0A0R4IP13
swissprot - F1QVE2
swissprot - A0A0R4IZF0
swissprot - R4GEN0
ZFIN ID - ZDB-GENE-050214-1
Ensembl - ENSDARG00000008127
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCDH15ENSGALG00000002744Gallus gallus
 PCDH15ENSG00000150275Homo sapiens
 Pcdh15ENSMUSG00000052613Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcdh15a / protocadherin-related 15a / Q99PJ1* / PCDH15* / Q96QU1* / Protocadherin-15 * / protocadherin related 15*ENSDARG0000009825762
pcdh7a / protocadherin 7aENSDARG0000007889813
pcdh7b / protocadherin 7b / PCDH7* / O60245* / protocadherin 7*ENSDARG0000006061013
pcdh1a / protocadherin 1a / PCDH1* / Q08174* / protocadherin 1*ENSDARG0000006272013
pcdh1b / protocadherin 1b / PCDH1* / Q08174* / protocadherin 1*ENSDARG0000003617512
pcdh11 / protocadherin 11 / Q9BZA7* / Q9BZA8* / PCDH11Y* / PCDH11X* / protocadherin 11 X-linked* / protocadherin 11 Y-linked*ENSDARG0000009865212
pcdh9 / protocadherin 9 / Q9HC56*ENSDARG0000006326412
pcdh2aa15 / protocadherin 2 alpha a 15 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* ...ENSDARG0000008813611
pcdh1a3 / pcdh1a6 / protocadherin 1 alpha 3 / PCDHA3* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y...ENSDARG0000010459811
pcdh2ab2 / protocadherin 2 alpha b2 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q...ENSDARG0000003769111
pcdh10b / protocadherin 10bENSDARG0000010282411
pcdh2ab12 / protocadherin 2 alpha b 12 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* ...ENSDARG0000010408011
pcdh2ab2 / protocadherin 2 alpha b2 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q...ENSDARG0000009946811
pcdh1a3 / protocadherin 1 alpha 3 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q9Y...ENSDARG0000010360211
pcdh2ab3 / protocadherin 2 alpha b 3 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000010271911
pcdh2ab1 / protocadherin 2 alpha b 1 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000007190411
pcdh2ab6 / protocadherin 2 alpha b 6 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000009104311
pcdh2ab1 / pcdh2ab8 / protocadherin 2 alpha b 8 / PCDHA3* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* /...ENSDARG0000008987411
pcdh2aa1 / protocadherin 2 alpha a 1 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000003769511
pcdh20 / protocadherin 20 / Q8N6Y1* / AL592490.1*ENSDARG0000003642410


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030718  Protocadherin-15


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001654 eye development IMP
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0048839 inner ear development IEA
 biological_processGO:0050908 detection of light stimulus involved in visual perception IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032420 stereocilium IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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