ENSDARG00000009438


Danio rerio

Features
Gene ID: ENSDARG00000009438
  
Biological name :myog
  
Synonyms : myog / myogenin
  
Possible biological names infered from orthology : P12979 / P15173
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 22592935
Gene end: 22605981
  
Corresponding Affymetrix probe sets: Dr.2499.1.S1_at (Zebrafish Array)   NM_131006_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000010347
Ensembl peptide - ENSDARP00000147847
Ensembl peptide - ENSDARP00000137676
NCBI entrez gene - 30200     See in Manteia.
RefSeq - NM_131006
RefSeq Peptide - NP_571081
swissprot - B0S6I5
swissprot - A0A0R4IN45
ZFIN ID - ZDB-GENE-980526-265
Ensembl - ENSDARG00000009438
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYOGENSGALG00000000172Gallus gallus
 MYOGENSG00000122180Homo sapiens
 MyogENSMUSG00000026459Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myf6 / Q6VNZ9 / myogenic factor 6 / P15375* / P23409*ENSDARG0000002983040
myf5 / myogenic factor 5 / P13349* / P24699*ENSDARG0000000727731
myod1 / Q90477 / myogenic differentiation 1 / P10085* / P15172* / Myoblast determination protein 1 *ENSDARG0000003011030


Protein motifs (from Interpro)
Interpro ID Name
 IPR002546  Myogenic basic muscle-specific protein
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0007519 skeletal muscle tissue development IGI
 biological_processGO:0014823 response to activity IDA
 biological_processGO:0014835 myoblast differentiation involved in skeletal muscle regeneration IMP
 biological_processGO:0014844 myoblast proliferation involved in skeletal muscle regeneration IMP
 biological_processGO:0035914 skeletal muscle cell differentiation IBA
 biological_processGO:0045663 positive regulation of myoblast differentiation IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048743 positive regulation of skeletal muscle fiber development IBA
 biological_processGO:1901741 positive regulation of myoblast fusion IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003705 transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding IBA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000328 cephalic musculature cephalic musculature aplastic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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