ENSDARG00000010130


Danio rerio

Features
Gene ID: ENSDARG00000010130
  
Biological name :smpdl3b
  
Synonyms : smpdl3b / sphingomyelin phosphodiesterase, acid-like 3B
  
Possible biological names infered from orthology : P58242 / Q92485
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 4710977
Gene end: 4721629
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124218
swissprot - F8W4E2
ZFIN ID - ZDB-GENE-041008-132
Ensembl - ENSDARG00000010130
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SMPDL3BENSGALG00000000737Gallus gallus
 Q92485ENSG00000130768Homo sapiens
 P58242ENSMUSG00000028885Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smpdl3a / sphingomyelin phosphodiesterase, acid-like 3A / Q92484*ENSDARG0000005311932
smpd1 / sphingomyelin phosphodiesterase 1, acid lysosomal / P17405* / Q04519* / sphingomyelin phosphodiesterase 1*ENSDARG0000007612125


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR017064  Acid sphingomyelinase-like phosphodiesterase, predicted
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006685 sphingomyelin catabolic process IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0004767 sphingomyelin phosphodiesterase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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