ENSGALG00000000737


Gallus gallus

Features
Gene ID: ENSGALG00000000737
  
Biological name :SMPDL3B
  
Synonyms : SMPDL3B / sphingomyelin phosphodiesterase acid like 3B
  
Possible biological names infered from orthology : P58242 / Q92485
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 1490484
Gene end: 1496253
  
Corresponding Affymetrix probe sets: Gga.17301.1.S1_at (Chicken Array)   GgaAffx.21962.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001051
NCBI entrez gene - 769013     See in Manteia.
RefSeq - NM_001252280
RefSeq - XM_015297553
RefSeq Peptide - NP_001239209
swissprot - F1N9C4
Ensembl - ENSGALG00000000737
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smpdl3bENSDARG00000010130Danio rerio
 Q92485ENSG00000130768Homo sapiens
 P58242ENSMUSG00000028885Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P70158* / Q92484* / SMPDL3A* / sphingomyelin phosphodiesterase acid like 3A*ENSGALG0000003027535
SMPD1 / sphingomyelin phosphodiesterase 1 / P17405* / Q04519* / sphingomyelin phosphodiesterase 1, acid lysosomal*ENSGALG0000003610626


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR017064  Acid sphingomyelinase-like phosphodiesterase, predicted
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006685 sphingomyelin catabolic process IEA
 biological_processGO:0034122 negative regulation of toll-like receptor signaling pathway IEA
 biological_processGO:0046466 membrane lipid catabolic process IEA
 biological_processGO:0050728 negative regulation of inflammatory response IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0004767 sphingomyelin phosphodiesterase activity IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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