ENSGALG00000030275


Gallus gallus

Features
Gene ID: ENSGALG00000030275
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : P70158 / Q92484 / SMPDL3A / sphingomyelin phosphodiesterase acid like 3A
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 61364647
Gene end: 61379970
  
Corresponding Affymetrix probe sets: GgaAffx.11549.1.S1_s_at (Chicken Array)   GgaAffx.9441.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048353
Ensembl peptide - ENSGALP00000050359
NCBI entrez gene - 776223     See in Manteia.
RefSeq - XM_001235756
swissprot - A0A1D5P6M6
swissprot - A0A1D5PC73
Ensembl - ENSGALG00000030275
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smpdl3aENSDARG00000053119Danio rerio
 Q92484ENSG00000172594Homo sapiens
 P70158ENSMUSG00000019872Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SMPDL3B / sphingomyelin phosphodiesterase acid like 3B / P58242* / Q92485*ENSGALG0000000073734
SMPD1 / sphingomyelin phosphodiesterase 1 / P17405* / Q04519* / sphingomyelin phosphodiesterase 1, acid lysosomal*ENSGALG0000003610626


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR017064  Acid sphingomyelinase-like phosphodiesterase, predicted
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006685 sphingomyelin catabolic process IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0004767 sphingomyelin phosphodiesterase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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