ENSDARG00000010784
Danio rerio | |
Features
| Gene ID: | ENSDARG00000010784 | | | | | Biological name : | ppp1r12a | | | | | Synonyms : | ppp1r12a / protein phosphatase 1, regulatory subunit 12A | | | | | Possible biological names infered from orthology : | O14974 / protein phosphatase 1, regulatory (inhibitor) subunit 12A / Q9DBR7 | | | | | Species: | Danio rerio | | | | | Chr. number: | 4 | | Strand: | -1 | | Band: | | | Gene start: | 21488990 | | Gene end: | 21584158 | | | | | Corresponding Affymetrix probe sets: | Dr.11256.1.A1_at (Zebrafish Array) Dr.15181.1.S1_at (Zebrafish Array) NM_001003870_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000118021
NCBI entrez gene - 445393
See in Manteia.
RefSeq - NM_001003870
RefSeq Peptide - NP_001003870
swissprot - Z4YIS0
ZFIN ID - ZDB-GENE-041011-3
Ensembl - ENSDARG00000010784
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| ppp1r12c / protein phosphatase 1, regulatory subunit 12C / Q9BZL4* | ENSDARG00000052423 | 27 | | ppp1r16a / protein phosphatase 1, regulatory subunit 16A / Q923M0* / Q96I34* / protein phosphatase 1, regulatory (inhibitor) subunit 16A* | ENSDARG00000076980 | 14 | | ppp1r13bb / protein phosphatase 1, regulatory subunit 13Bb / Q96KQ4* / Q62415* / PPP1R13B* / protein phosphatase 1 regulatory subunit 13B* / protein phosphatase 1, regulatory (inhibitor) subunit 13B* | ENSDARG00000009142 | 11 | | ppp1r13ba / protein phosphatase 1, regulatory subunit 13Ba / Q96KQ4* / Q62415* / PPP1R13B* / protein phosphatase 1 regulatory subunit 13B* / protein phosphatase 1, regulatory (inhibitor) subunit 13B* | ENSDARG00000004377 | 11 | | ppp1r16b / protein phosphatase 1, regulatory subunit 16B / Q8VHQ3* / Q96T49* / protein phosphatase 1, regulatory (inhibitor) subunit 16B* | ENSDARG00000079860 | 11 | | tp53bp2a / tumor protein p53 binding protein, 2a / Q13625* / TP53BP2* / Trp53bp2* / tumor protein p53 binding protein 2* / transformation related protein 53 binding protein 2* | ENSDARG00000009136 | 10 | | tp53bp2b / tumor protein p53 binding protein, 2b / Q13625* / TP53BP2* / Trp53bp2* / tumor protein p53 binding protein 2* / transformation related protein 53 binding protein 2* | ENSDARG00000054858 | 10 | | BX323087.1 / O60237* / PPP1R12B* / protein phosphatase 1 regulatory subunit 12B* | ENSDARG00000117155 | 7 | | CABZ01068600.1 | ENSDARG00000113454 | 7 | | ppp1r13l / protein phosphatase 1, regulatory subunit 13 like / Q5I1X5* / Q8WUF5* / protein phosphatase 1, regulatory (inhibitor) subunit 13 like* | ENSDARG00000013777 | 6 | | CU693479.1 / Q86WC6* / PPP1R27* / protein phosphatase 1 regulatory subunit 27* | ENSDARG00000116806 | 5 | | ppp1r27b / protein phosphatase 1, regulatory subunit 27b / Q9D119* / Q86WC6* / PPP1R27* / protein phosphatase 1 regulatory subunit 27* | ENSDARG00000100504 | 4 | | Q7T3Y0 / nrarpa / NOTCH regulated ankyrin repeat protein a / NRARP* / Q7Z6K4* / Q91ZA8* / NOTCH regulated ankyrin repeat protein* / Notch-regulated ankyrin repeat-containing protein * | ENSDARG00000091419 | 3 | | nrarpb / Q7T3X9 / NOTCH regulated ankyrin repeat protein b | ENSDARG00000018958 | 3 |
Protein motifs (from Interpro)
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000004 | anterior axial hypoblast | anterior axial hypoblast lamellipodium decreased amount , abnormal
anterior axial hypoblast filopodium decreased amount , abnormal
anterior axial hypoblast bleb increased amount , abnormal |
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| | ZFA:0000008 | brain | brain surface feature shape , abnormal
brain necrotic , abnormal |
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| | ZFA:0000029 | hindbrain | hindbrain axon mislocalised , abnormal
hindbrain glial cell (sensu Vertebrata) mislocalised , abnormal |
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| | ZFA:0000042 | midbrain hindbrain boundary | midbrain hindbrain boundary basal side increased angle to brain epithelium, abnormal
midbrain hindbrain boundary cell decreased length , abnormal
midbrain hindbrain boundary cell increased width , abnormal
midbrain hindbrain boundary cell increased area , abnormal
midbrain hindbrain boundary cell length , ameliorated |
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| | ZFA:0000054 | pericardium | pericardium edematous , abnormal |
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| | ZFA:0000059 | postoptic commissure | postoptic commissure morphology , abnormal
postoptic commissure defasciculated , abnormal
postoptic commissure commissural neuron axon guidance disrupted , abnormal
postoptic commissure astrocyte mislocalised , abnormal |
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| | ZFA:0000075 | spinal cord | spinal cord has fewer parts of type ventricular zone radial glial cell, abnormal
spinal cord glial cell (sensu Vertebrata) mislocalised , abnormal
spinal cord neuron mislocalised , abnormal |
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| | ZFA:0000084 | yolk | yolk edematous , abnormal |
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| | ZFA:0000109 | forebrain | forebrain commissural neuron axon guidance disrupted , abnormal |
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| | ZFA:0000112 | gut | gut endodermal cell disorganized , abnormal |
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| | ZFA:0000114 | heart | heart increased accumulation blood , abnormal
heart quality , abnormal |
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| | ZFA:0000121 | lateral plate mesoderm | lateral plate mesoderm actin filament bundle increased size , abnormal
lateral plate mesoderm mesodermal cell disorganized , abnormal
lateral plate mesoderm apoptotic , abnormal
lateral plate mesoderm morphology , abnormal |
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| | ZFA:0000123 | liver | liver aplastic , abnormal
liver hepatocyte apoptotic , abnormal
liver decreased size , abnormal
liver mislocalised ventrally , abnormal |
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| | ZFA:0000124 | liver primordium | liver primordium decreased size , abnormal
liver primordium mislocalised posteriorly , abnormal |
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| | ZFA:0000135 | notochord | notochord undulate , abnormal |
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| | ZFA:0000155 | somite | somite quality , abnormal |
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| | ZFA:0000435 | cranial nerve II | cranial nerve II absent , abnormal
cranial nerve II decreased size , abnormal
cranial nerve II defasciculated , abnormal
cranial nerve II commissural neuron axon guidance disrupted , abnormal |
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| | ZFA:0001094 | whole organism | whole organism viability , abnormal
whole organism necrotic , abnormal
whole organism anterior-posterior axis shortened , abnormal |
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| | ZFA:0001108 | anterior commissure | anterior commissure morphology , abnormal
anterior commissure defasciculated , abnormal
anterior commissure commissural neuron axon guidance disrupted , abnormal
anterior commissure astrocyte mislocalised , abnormal |
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| | ZFA:0001114 | head | head flat , abnormal
head edematous , abnormal
head decreased size , abnormal
head surface feature shape , abnormal |
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| | ZFA:0001115 | trunk | trunk necrotic , abnormal
trunk undulate , abnormal
trunk has fewer parts of type motor neuron axon, abnormal
trunk has fewer parts of type nerve glial cell (sensu Vertebrata), abnormal
trunk nerve truncated , abnormal |
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| | ZFA:0001117 | post-vent region | post-vent region quality , abnormal |
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| | ZFA:0001249 | exocrine pancreas | exocrine pancreas decreased size , abnormal
exocrine pancreas aplastic , abnormal |
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| | ZFA:0001261 | ventricular system | ventricular system structure, cavities , abnormal |
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| | ZFA:0009052 | motor neuron | motor neuron bleb assembly occurrence , ameliorated
motor neuron bleb assembly increased occurrence , abnormal
motor neuron membrane decreased amount , abnormal
motor neuron axon guidance process quality , abnormal |
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| | ZFA:0009063 | peripheral neuron | peripheral neuron quality , abnormal |
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| | ZFA:0009111 | hepatocyte | hepatocyte decreased amount , abnormal |
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| | ZFA:0009139 | endodermal cell | endodermal cell actin filament bundle increased size , abnormal |
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| | ZFA:0009243 | CaP motoneuron | CaP motoneuron axonogenesis process quality , abnormal
CaP motoneuron axon morphology , abnormal
CaP motoneuron axon increased branchiness , abnormal
CaP motoneuron cell body position , ameliorated
CaP motoneuron cell body mislocalised anteriorly , abnormal |
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| | ZFA:0009292 | radial glial cell | radial glial cell cell projection disorganized , abnormal |
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| | ZFA:0009306 | neuroepithelial cell | neuroepithelial cell actin filament decreased accumulation midbrain hindbrain boundary basal region, abnormal |
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Interacting proteins (from Reactome)
No match
1 s.
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