ENSDARG00000004377


Danio rerio

Features
Gene ID: ENSDARG00000004377
  
Biological name :ppp1r13ba
  
Synonyms : ppp1r13ba / protein phosphatase 1, regulatory subunit 13Ba
  
Possible biological names infered from orthology : PPP1R13B / protein phosphatase 1, regulatory (inhibitor) subunit 13B / protein phosphatase 1 regulatory subunit 13B / Q62415 / Q96KQ4
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 14614145
Gene end: 14691576
  
Corresponding Affymetrix probe sets: Dr.20391.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000028707
NCBI entrez gene - 563577     See in Manteia.
RefSeq - XM_009292887
RefSeq - XM_009292888
RefSeq - NM_001204257
RefSeq Peptide - NP_001191186
swissprot - F1RDT1
ZFIN ID - ZDB-GENE-030131-9805
Ensembl - ENSDARG00000004377
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPP1R13BENSGALG00000011548Gallus gallus
 Q96KQ4ENSG00000088808Homo sapiens
 Q62415ENSMUSG00000021285Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppp1r13bb / protein phosphatase 1, regulatory subunit 13Bb / Q96KQ4* / Q62415* / PPP1R13B* / protein phosphatase 1 regulatory subunit 13B* / protein phosphatase 1, regulatory (inhibitor) subunit 13B*ENSDARG0000000914264
tp53bp2a / tumor protein p53 binding protein, 2a / Q13625* / TP53BP2* / Trp53bp2* / tumor protein p53 binding protein 2* / transformation related protein 53 binding protein 2*ENSDARG0000000913641
tp53bp2b / tumor protein p53 binding protein, 2b / Q13625* / TP53BP2* / Trp53bp2* / tumor protein p53 binding protein 2* / transformation related protein 53 binding protein 2*ENSDARG0000005485841
ppp1r13l / protein phosphatase 1, regulatory subunit 13 like / Q5I1X5* / Q8WUF5* / protein phosphatase 1, regulatory (inhibitor) subunit 13 like*ENSDARG0000001377716
ppp1r12a / protein phosphatase 1, regulatory subunit 12A / O14974* / Q9DBR7* / protein phosphatase 1, regulatory (inhibitor) subunit 12A*ENSDARG0000001078411
ppp1r12c / protein phosphatase 1, regulatory subunit 12C / Q9BZL4*ENSDARG000000524237
ppp1r16a / protein phosphatase 1, regulatory subunit 16A / Q923M0* / Q96I34* / protein phosphatase 1, regulatory (inhibitor) subunit 16A*ENSDARG000000769806
ppp1r16b / protein phosphatase 1, regulatory subunit 16B / Q8VHQ3* / Q96T49* / protein phosphatase 1, regulatory (inhibitor) subunit 16B*ENSDARG000000798605
CU693479.1 / Q86WC6* / PPP1R27* / protein phosphatase 1 regulatory subunit 27*ENSDARG000001168063
BX323087.1 / O60237* / PPP1R12B* / protein phosphatase 1 regulatory subunit 12B*ENSDARG000001171552
CABZ01068600.1ENSDARG000001134542
ppp1r27b / protein phosphatase 1, regulatory subunit 27b / Q9D119* / Q86WC6* / PPP1R27* / protein phosphatase 1 regulatory subunit 27*ENSDARG000001005042
Q7T3Y0 / nrarpa / NOTCH regulated ankyrin repeat protein a / NRARP* / Q7Z6K4* / Q91ZA8* / NOTCH regulated ankyrin repeat protein* / Notch-regulated ankyrin repeat-containing protein *ENSDARG000000914191
nrarpb / Q7T3X9 / NOTCH regulated ankyrin repeat protein bENSDARG000000189581


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR028319  Apoptosis-stimulating of p53 protein 1
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0045786 negative regulation of cell cycle IEA
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Association with Co-factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000017953 tp73 / tumor protein p73 / Trp73* / Q9JJP2* / O15350* / transformation related protein 73*  / complex / reaction
 ENSDARG00000035559 tp53 / P79734 / tumor protein p53 / Trp53* / P04637* / P02340* / transformation related protein 53*  / reaction / complex






 

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