ENSGALG00000011548


Gallus gallus

Features
Gene ID: ENSGALG00000011548
  
Biological name :PPP1R13B
  
Synonyms : PPP1R13B / protein phosphatase 1 regulatory subunit 13B
  
Possible biological names infered from orthology : protein phosphatase 1, regulatory (inhibitor) subunit 13B / Q62415 / Q96KQ4
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 50573878
Gene end: 50636169
  
Corresponding Affymetrix probe sets: Gga.7098.1.S1_at (Chicken Array)   GgaAffx.21276.1.S1_s_at (Chicken Array)   GgaAffx.23583.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057265
Ensembl peptide - ENSGALP00000018813
NCBI entrez gene - 423487     See in Manteia.
RefSeq - XM_421392
RefSeq - XM_015287840
RefSeq - XM_015287841
RefSeq - XM_004936380
RefSeq - XM_004936383
RefSeq - XM_015287836
RefSeq - XM_015287837
RefSeq - XM_015287838
RefSeq - XM_015287839
swissprot - F1NWV9
swissprot - A0A1D5PWD4
Ensembl - ENSGALG00000011548
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppp1r13baENSDARG00000004377Danio rerio
 ppp1r13bbENSDARG00000009142Danio rerio
 Q96KQ4ENSG00000088808Homo sapiens
 Q62415ENSMUSG00000021285Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TP53BP2 / tumor protein p53 binding protein 2 / Q13625* / Trp53bp2* / transformation related protein 53 binding protein 2*ENSGALG0000004281643
Q90623 / PPP1R12A / Protein phosphatase 1 regulatory subunit 12A / Q9DBR7* / O14974* / protein phosphatase 1, regulatory (inhibitor) subunit 12A*ENSGALG0000001032510
PPP1R16B / protein phosphatase 1 regulatory subunit 16B / Q8VHQ3* / Q96T49* / protein phosphatase 1, regulatory (inhibitor) subunit 16B*ENSGALG000000035687
PPP1R27 / protein phosphatase 1 regulatory subunit 27 / Q86WC6* / Q9D119*ENSGALG000000359132
ENSGALG000000314542
PPP1R12BENSGALG000000003362
NRARP / NOTCH regulated ankyrin repeat protein / Q7Z6K4* / Q91ZA8* / Notch-regulated ankyrin repeat-containing protein *ENSGALG000000272311


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR028319  Apoptosis-stimulating of p53 protein 1
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0045786 negative regulation of cell cycle IEA
 biological_processGO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Association with Co-factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000007324 TP63 / tumor protein 63 / Trp63* / O88898* / Q9H3D4* / tumor protein p63* / transformation related protein 63*  / complex / reaction
 ENSGALG00000001006 TP73 / tumor protein p73 / Trp73* / Q9JJP2* / O15350* / transformation related protein 73*  / reaction / complex






 

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