ENSDARG00000013777


Danio rerio

Features
Gene ID: ENSDARG00000013777
  
Biological name :ppp1r13l
  
Synonyms : ppp1r13l / protein phosphatase 1, regulatory subunit 13 like
  
Possible biological names infered from orthology : protein phosphatase 1, regulatory (inhibitor) subunit 13 like / Q5I1X5 / Q8WUF5
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 35842933
Gene end: 35899617
  
Corresponding Affymetrix probe sets: Dr.19303.1.A1_at (Zebrafish Array)   NM_001014320_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000106399
Ensembl peptide - ENSDARP00000126054
Ensembl peptide - ENSDARP00000151632
NCBI entrez gene - 541507     See in Manteia.
RefSeq - NM_001014320
RefSeq - XM_005173643
RefSeq - XM_005173644
RefSeq Peptide - NP_001014342
swissprot - Q1L9A3
swissprot - I3IT03
ZFIN ID - ZDB-GENE-050327-33
Ensembl - ENSDARG00000013777
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8WUF5ENSG00000104881Homo sapiens
 Q5I1X5ENSMUSG00000040734Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tp53bp2b / tumor protein p53 binding protein, 2b / Q13625* / TP53BP2* / Trp53bp2* / tumor protein p53 binding protein 2* / transformation related protein 53 binding protein 2*ENSDARG0000005485824
ppp1r13bb / protein phosphatase 1, regulatory subunit 13Bb / Q96KQ4* / Q62415* / PPP1R13B* / protein phosphatase 1 regulatory subunit 13B* / protein phosphatase 1, regulatory (inhibitor) subunit 13B*ENSDARG0000000914224
tp53bp2a / tumor protein p53 binding protein, 2a / Q13625* / TP53BP2* / Trp53bp2* / tumor protein p53 binding protein 2* / transformation related protein 53 binding protein 2*ENSDARG0000000913623
ppp1r13ba / protein phosphatase 1, regulatory subunit 13Ba / Q96KQ4* / Q62415* / PPP1R13B* / protein phosphatase 1 regulatory subunit 13B* / protein phosphatase 1, regulatory (inhibitor) subunit 13B*ENSDARG0000000437723
ppp1r12a / protein phosphatase 1, regulatory subunit 12A / O14974* / Q9DBR7* / protein phosphatase 1, regulatory (inhibitor) subunit 12A*ENSDARG000000107848
ppp1r12c / protein phosphatase 1, regulatory subunit 12C / Q9BZL4*ENSDARG000000524236
ppp1r16b / protein phosphatase 1, regulatory subunit 16B / Q8VHQ3* / Q96T49* / protein phosphatase 1, regulatory (inhibitor) subunit 16B*ENSDARG000000798604
ppp1r16a / protein phosphatase 1, regulatory subunit 16A / Q923M0* / Q96I34* / protein phosphatase 1, regulatory (inhibitor) subunit 16A*ENSDARG000000769803
BX323087.1 / O60237* / PPP1R12B* / protein phosphatase 1 regulatory subunit 12B*ENSDARG000001171552
CU693479.1 / Q86WC6* / PPP1R27* / protein phosphatase 1 regulatory subunit 27*ENSDARG000001168061
ppp1r27b / protein phosphatase 1, regulatory subunit 27b / Q9D119* / Q86WC6* / PPP1R27* / protein phosphatase 1 regulatory subunit 27*ENSDARG000001005041
CABZ01068600.1ENSDARG000001134541
nrarpb / Q7T3X9 / NOTCH regulated ankyrin repeat protein bENSDARG000000189580
Q7T3Y0 / nrarpa / NOTCH regulated ankyrin repeat protein a / NRARP* / Q7Z6K4* / Q91ZA8* / NOTCH regulated ankyrin repeat protein* / Notch-regulated ankyrin repeat-containing protein *ENSDARG000000914190


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR028320  RelA-associated inhibitor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006915 apoptotic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Association with Co-factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000017953 tp73 / tumor protein p73 / Trp73* / Q9JJP2* / O15350* / transformation related protein 73*  / reaction / complex
 ENSDARG00000035559 tp53 / P79734 / tumor protein p53 / Trp53* / P04637* / P02340* / transformation related protein 53*  / complex / reaction






 

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