Manteia

ENSDARG00000011094

Danio rerio

Features

Gene ID:	ENSDARG00000011094

Biological name :	ccna2

Synonyms :	ccna2 / cyclin A2

Possible biological names infered from orthology :	P20248 / P51943

Species:	Danio rerio

Chr. number:	14
Strand:	-1
Band:
Gene start:	46354648
Gene end:	46374870

Corresponding Affymetrix probe sets:	Dr.25190.1.S1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000029094 Ensembl peptide - ENSDARP00000146428 Ensembl peptide - ENSDARP00000156205 NCBI entrez gene - 192295 See in Manteia. swissprot - Q6NV43 ZFIN ID - ZDB-GENE-020418-1 Ensembl - ENSDARG00000011094

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
ccna1 / cyclin A1 / P78396* / Q61456*	ENSDARG00000043236	41
ccnb3 / cyclin B3 / Q8WWL7*	ENSDARG00000034855	24
ccnb2 / cyclin B2 / O95067* / P30276* / G2/mitotic-specific cyclin-B2 *	ENSDARG00000036180	24
ccnb1 / cyclin B1 / P14635* / P24860* / G2/mitotic-specific cyclin-B1 *	ENSDARG00000051923	23
ccne1 / cyclin E1 / P24864* / Q61457* / G1/S-specific cyclin-E1 *	ENSDARG00000098622	19
ccne2 / cyclin E2 / O96020* / Q9Z238* / G1/S-specific cyclin-E2 *	ENSDARG00000098529	18
FQ311924.1 / CCNO* / P22674* / cyclin O*	ENSDARG00000099542	16
ccnd1 / Q90459 / cyclin D1 / P24385* / P25322* / G1/S-specific cyclin-D1 *	ENSDARG00000101637	14
ccnd2a / cyclin D2, a / CCND2* / P30279* / P30280* / cyclin D2* / G1/S-specific cyclin-D2 *	ENSDARG00000051748	13
ccnd2b / cyclin D2, b / CCND2* / P30279* / P30280* / cyclin D2* / G1/S-specific cyclin-D2 *	ENSDARG00000070408	13
ccnd3 / cyclin D3 / P30281* / P30282* / G1/S-specific cyclin-D3 *	ENSDARG00000027391	12
si:ch211-152f23.5	ENSDARG00000019741	11

Protein motifs (from Interpro)

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0060041	retina development in camera-type eye	IMP
cellular_component	GO:0005634	nucleus	IEA

Pathways (from Reactome)

Pathway description

G0 and Early G1

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0000012	central nervous system	central nervous system necrotic , abnormal	Show
ZFA:0000054	pericardium	pericardium edematous , abnormal	Show
ZFA:0000107	eye	eye decreased size , abnormal	Show
ZFA:0000112	gut	gut hypoplastic , abnormal gut quality , abnormal	Show
ZFA:0000123	liver	liver hypoplastic , abnormal liver quality , abnormal	Show
ZFA:0000152	retina	retina quality , abnormal	Show
ZFA:0000396	nervous system	nervous system quality , abnormal	Show
ZFA:0001114	head	head decreased width , abnormal head pointed , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr