ENSDARG00000012244


Danio rerio

Features
Gene ID: ENSDARG00000012244
  
Biological name :ube2e3
  
Synonyms : ube2e3 / ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
  
Possible biological names infered from orthology : P52483 / Q969T4 / ubiquitin conjugating enzyme E2 E3
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 43797902
Gene end: 43883267
  
Corresponding Affymetrix probe sets: Dr.20040.1.S1_at (Zebrafish Array)   Dr.23793.1.A1_at (Zebrafish Array)   NM_200921_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000149158
Ensembl peptide - ENSDARP00000010840
NCBI entrez gene - 321689     See in Manteia.
RefSeq - NM_200921
RefSeq Peptide - NP_957215
swissprot - B0S6A7
ZFIN ID - ZDB-GENE-030131-408
Ensembl - ENSDARG00000012244
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBE2E3ENSGALG00000020793Gallus gallus
 Q969T4ENSG00000170035Homo sapiens
 P52483ENSMUSG00000027011Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ube2e2 / ubiquitin-conjugating enzyme E2E 2 / Q91W82* / Q96LR5* / UBE2E1* / P52482* / P51965* / ubiquitin conjugating enzyme E2 E1*ENSDARG0000003467084
rpl15 / ube2e1 / ubiquitin-conjugating enzyme E2E 1 / Q96LR5* / P51965* / UBE2E2* / ubiquitin conjugating enzyme E2 E2*ENSDARG0000011664976
ube2d2 / ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) / P62838* / P62837* / Ube2d2a* / ubiquitin conjugating enzyme E2 D2* / ubiquitin-conjugating enzyme E2D 2A*ENSDARG0000004348445
ube2d2l / ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), likeENSDARG0000009974944
ube2d3 / ubiquitin-conjugating enzyme E2D 3ENSDARG0000003847344
ube2d1a / ubiquitin-conjugating enzyme E2D 1aENSDARG0000002910743
ube2d1b / ubiquitin-conjugating enzyme E2D 1b / UBE2D1* / P51668* / P61080* / ubiquitin conjugating enzyme E2 D1*ENSDARG0000003857643
ube2d4 / ubiquitin-conjugating enzyme E2D 4 (putative) / Q9Y2X8*ENSDARG0000001505743
ube2l3a / ubiquitin-conjugating enzyme E2L 3a / UBE2L5* / P68036* / UBE2L3* / ubiquitin conjugating enzyme E2 L3* / ubiquitin conjugating enzyme E2 L5*ENSDARG0000011208725
ube2l3b / ubiquitin-conjugating enzyme E2L 3b / UBE2L3* / P68036* / P68037* / UBE2L5* / ubiquitin conjugating enzyme E2 L3* / ubiquitin conjugating enzyme E2 L5*ENSDARG0000002714123
ube2s / Q4V908 / ubiquitin-conjugating enzyme E2S / Q16763* / Q921J4*ENSDARG0000003177523


Protein motifs (from Interpro)
Interpro ID Name
 IPR000608  Ubiquitin-conjugating enzyme E2
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR023313  Ubiquitin-conjugating enzyme, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of active ubiquitin: roles of E1 and E2 enzymes
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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