ENSDARG00000027141


Danio rerio

Features
Gene ID: ENSDARG00000027141
  
Biological name :ube2l3b
  
Synonyms : ube2l3b / ubiquitin-conjugating enzyme E2L 3b
  
Possible biological names infered from orthology : P68036 / P68037 / UBE2L3 / UBE2L5 / ubiquitin conjugating enzyme E2 L3 / ubiquitin conjugating enzyme E2 L5
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 13337507
Gene end: 13353905
  
Corresponding Affymetrix probe sets: Dr.17481.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000008064
Ensembl peptide - ENSDARP00000116310
Ensembl peptide - ENSDARP00000090376
NCBI entrez gene - 321943     See in Manteia.
RefSeq - NM_001082797
RefSeq Peptide - NP_001076266
swissprot - A2BIR5
swissprot - A2BIR4
swissprot - A2BIR3
ZFIN ID - ZDB-GENE-030131-662
Ensembl - ENSDARG00000027141
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBE2L3ENSGALG00000036739Gallus gallus
 P68036ENSG00000185651Homo sapiens
 UBE2L5ENSG00000236444Homo sapiens
 P68037ENSMUSG00000038965Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ube2l3a / ubiquitin-conjugating enzyme E2L 3a / UBE2L5* / P68036* / UBE2L3* / ubiquitin conjugating enzyme E2 L3* / ubiquitin conjugating enzyme E2 L5*ENSDARG0000011208779
ube2d2 / ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) / P62838* / P62837* / Ube2d2a* / ubiquitin conjugating enzyme E2 D2* / ubiquitin-conjugating enzyme E2D 2A*ENSDARG0000004348429
ube2d4 / ubiquitin-conjugating enzyme E2D 4 (putative) / Q9Y2X8*ENSDARG0000001505729
ube2d3 / ubiquitin-conjugating enzyme E2D 3ENSDARG0000003847328
ube2d1a / ubiquitin-conjugating enzyme E2D 1aENSDARG0000002910728
ube2d2l / ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), likeENSDARG0000009974928
ube2d1b / ubiquitin-conjugating enzyme E2D 1b / UBE2D1* / P51668* / P61080* / ubiquitin conjugating enzyme E2 D1*ENSDARG0000003857628
ube2e2 / ubiquitin-conjugating enzyme E2E 2 / Q91W82* / Q96LR5* / UBE2E1* / P52482* / P51965* / ubiquitin conjugating enzyme E2 E1*ENSDARG0000003467026
ube2e3 / ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) / P52483* / Q969T4* / ubiquitin conjugating enzyme E2 E3*ENSDARG0000001224426
rpl15 / ube2e1 / ubiquitin-conjugating enzyme E2E 1 / Q96LR5* / P51965* / UBE2E2* / ubiquitin conjugating enzyme E2 E2*ENSDARG0000011664925
ube2s / Q4V908 / ubiquitin-conjugating enzyme E2S / Q16763* / Q921J4*ENSDARG0000003177522


Protein motifs (from Interpro)
Interpro ID Name
 IPR000608  Ubiquitin-conjugating enzyme E2
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR023313  Ubiquitin-conjugating enzyme, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of active ubiquitin: roles of E1 and E2 enzymes
E3 ubiquitin ligases ubiquitinate target proteins
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr