ENSDARG00000014910


Danio rerio

Features
Gene ID: ENSDARG00000014910
  
Biological name :panx1b
  
Synonyms : pannexin 1b / panx1b
  
Possible biological names infered from orthology : pannexin 1 / PANX1 / Q96RD7 / Q9JIP4
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 37840914
Gene end: 37852508
  
Corresponding Affymetrix probe sets: Dr.18672.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000088509
NCBI entrez gene - 567417     See in Manteia.
RefSeq - NM_001100030
RefSeq Peptide - NP_001093500
swissprot - F1QSR7
ZFIN ID - ZDB-GENE-070705-192
Ensembl - ENSDARG00000014910
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PANX1ENSGALG00000039751Gallus gallus
 PANX1ENSG00000110218Homo sapiens
 Panx1ENSMUSG00000031934Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
panx1a / pannexin 1a / PANX1* / Q96RD7* / Q9JIP4* / pannexin 1*ENSDARG0000002528556
panx3 / pannexin 3 / Q8CEG0* / Q96QZ0*ENSDARG0000000462735
panx2 / pannexin 2 / Q6IMP4* / Q96RD6*ENSDARG0000006301923


Protein motifs (from Interpro)
Interpro ID Name
 IPR000990  Innexin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006812 cation transport IBA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0015267 channel activity IDA
 molecular_functionGO:0022829 wide pore channel activity IDA
 molecular_functionGO:0022832 voltage-gated channel activity IDA


Pathways (from Reactome)
Pathway description
Electric Transmission Across Gap Junctions
The NLRP3 inflammasome


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000063019 panx2 / pannexin 2 / Q6IMP4* / Q96RD6*  / complex
 ENSDARG00000014910 panx1b / pannexin 1b / PANX1* / Q96RD7* / Q9JIP4* / pannexin 1*  / complex






 

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