ENSDARG00000015006


Danio rerio

Features
Gene ID: ENSDARG00000015006
  
Biological name :dnm1l
  
Synonyms : dnm1l / dynamin 1-like / Q7SXN5
  
Possible biological names infered from orthology : Dynamin-1-like protein / O00429 / Q8K1M6
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 20229573
Gene end: 20258634
  
Corresponding Affymetrix probe sets: Dr.25932.1.A1_at (Zebrafish Array)   Dr.4370.1.A1_at (Zebrafish Array)   NM_200922_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000115534
Ensembl peptide - ENSDARP00000006315
Ensembl peptide - ENSDARP00000118472
Ensembl peptide - ENSDARP00000142560
NCBI entrez gene - 393896     See in Manteia.
RefSeq - NM_200922
RefSeq Peptide - NP_957216
swissprot - F1Q917
swissprot - A0A140LH30
swissprot - F1QB59
swissprot - Q7SXN5
ZFIN ID - ZDB-GENE-040426-1556
Ensembl - ENSDARG00000015006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DNM1LENSGALG00000012929Gallus gallus
 DNM1LENSG00000087470Homo sapiens
 Dnm1lENSMUSG00000022789Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-32e23.4ENSDARG0000006315969
dnm3a / dynamin 3aENSDARG0000003223841
dnm2a / dynamin 2aENSDARG0000006993741
dnm1b / dynamin 1b / DNM1* / P39053* / Q05193* / dynamin 1*ENSDARG0000000928140
dnm1a / dynamin 1a / DNM1* / P39053* / Q05193* / dynamin 1*ENSDARG0000001004240
mxa / myxovirus (influenza) resistance AENSDARG0000002168825
mxe / Q800G5 / myxovirus (influenza virus) resistance E / MX1* / MX2* / P20591* / P20592* / Q9WVP9* / MX dynamin like GTPase 2* / MX dynamin like GTPase 1* / Mus musculus MX dynamin-like GT...ENSDARG0000001442724
mxb / myxovirus (influenza) resistance BENSDARG0000000495324
mxf / myxovirus (influenza virus) resistance FENSDARG0000002604924
mxg / myxovirus (influenza virus) resistance GENSDARG0000000801923
si:dkeyp-110c12.3ENSDARG0000005179523
mxc / Q6DKF0 / myxovirus (influenza virus) resistance C / MX1* / MX2* / Q9WVP9* / P20591* / P20592* / MX dynamin like GTPase 2* / MX dynamin like GTPase 1* / Mus musculus MX dynamin-like GT...ENSDARG0000002478922
mxd / myxovirus (influenza virus) resistance DENSDARG0000002336922
CABZ01092282.1ENSDARG0000010014521
dnm2b / dynamin 2b / DNM2* / P50570* / dynamin 2*ENSDARG0000010305419
CABZ01084501.2 / DNM2* / P50570* / dynamin 2*ENSDARG0000011333214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000375  Dynamin central domain
 IPR001401  Dynamin, GTPase domain
 IPR003130  Dynamin GTPase effector
 IPR011989  Armadillo-like helical
 IPR019762  Dynamin, GTPase region, conserved site
 IPR020850  GTPase effector domain
 IPR022812  Dynamin superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030381  Dynamin-type guanine nucleotide-binding (G) domain
 IPR030556  Dynamin-1-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000266 mitochondrial fission ISS
 biological_processGO:0003374 dynamin family protein polymerization involved in mitochondrial fission ISS
 biological_processGO:0016559 peroxisome fission IEA
 biological_processGO:0051259 protein complex oligomerization ISS
 biological_processGO:0061025 membrane fusion IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISS
 cellular_componentGO:0005741 mitochondrial outer membrane ISS
 cellular_componentGO:0005777 peroxisome ISS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031966 mitochondrial membrane IBA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity ISS
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0008017 microtubule binding IBA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0042803 protein homodimerization activity ISS


Pathways (from Reactome)
Pathway description
Apoptotic execution phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr