ENSG00000087470


Homo sapiens

Features
Gene ID: ENSG00000087470
  
Biological name :DNM1L
  
Synonyms : DNM1L / dynamin 1 like / O00429
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p11.21
Gene start: 32679200
Gene end: 32745650
  
Corresponding Affymetrix probe sets: 203105_s_at (Human Genome U133 Plus 2.0 Array)   226154_at (Human Genome U133 Plus 2.0 Array)   237797_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449089
Ensembl peptide - ENSP00000448936
Ensembl peptide - ENSP00000450399
Ensembl peptide - ENSP00000450401
Ensembl peptide - ENSP00000266481
Ensembl peptide - ENSP00000350948
Ensembl peptide - ENSP00000370388
Ensembl peptide - ENSP00000390090
Ensembl peptide - ENSP00000396030
Ensembl peptide - ENSP00000404160
Ensembl peptide - ENSP00000415131
Ensembl peptide - ENSP00000447013
Ensembl peptide - ENSP00000447788
Ensembl peptide - ENSP00000447845
Ensembl peptide - ENSP00000448105
Ensembl peptide - ENSP00000448610
Ensembl peptide - ENSP00000448802
NCBI entrez gene - 10059     See in Manteia.
OMIM - 603850
RefSeq - NM_001278465
RefSeq - NM_001278463
RefSeq - NM_001278464
RefSeq - NM_001278466
RefSeq - NM_005690
RefSeq - NM_012062
RefSeq - NM_012063
RefSeq - XM_005253282
RefSeq - XM_011520543
RefSeq - XM_011520544
RefSeq - XM_017018663
RefSeq - XM_017018664
RefSeq - XM_017018665
RefSeq Peptide - NP_001265394
RefSeq Peptide - NP_036193
RefSeq Peptide - NP_036192
RefSeq Peptide - NP_001265392
RefSeq Peptide - NP_001265393
RefSeq Peptide - NP_001265395
RefSeq Peptide - NP_001317309
RefSeq Peptide - NP_005681
swissprot - G8JLD5
swissprot - H0YHY4
swissprot - H0YI79
swissprot - B4DDQ3
swissprot - O00429
swissprot - B4DPZ9
swissprot - F8VR28
swissprot - F8VUJ9
swissprot - F8VYL3
swissprot - F8VZ52
swissprot - F8W1W3
Ensembl - ENSG00000087470
  
Related genetic diseases (OMIM): 610708 - Optic atrophy 5, 610708
  614388 - Encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1, 614388
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dnm1lENSDARG00000015006Danio rerio
 DNM1LENSGALG00000012929Gallus gallus
 Dnm1lENSMUSG00000022789Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DNM1 / Q05193 / dynamin 1ENSG0000010697640
DNM2 / P50570 / dynamin 2ENSG0000007980540
DNM3 / Q9UQ16 / dynamin 3ENSG0000019795940
MX1 / P20591 / MX dynamin like GTPase 1ENSG0000015760123
MX2 / P20592 / MX dynamin like GTPase 2ENSG0000018348623


Protein motifs (from Interpro)
Interpro ID Name
 IPR000375  Dynamin central domain
 IPR001401  Dynamin, GTPase domain
 IPR003130  Dynamin GTPase effector
 IPR019762  Dynamin, GTPase region, conserved site
 IPR020850  GTPase effector domain
 IPR022812  Dynamin superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030381  Dynamin-type guanine nucleotide-binding (G) domain
 IPR030556  Dynamin-1-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000266 mitochondrial fission IDA
 biological_processGO:0001836 release of cytochrome c from mitochondria IMP
 biological_processGO:0003374 dynamin family protein polymerization involved in mitochondrial fission IDA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0007005 mitochondrion organization IMP
 biological_processGO:0010637 negative regulation of mitochondrial fusion IEA
 biological_processGO:0010821 regulation of mitochondrion organization IMP
 biological_processGO:0012501 programmed cell death IEA
 biological_processGO:0016559 peroxisome fission IMP
 biological_processGO:0032459 regulation of protein oligomerization IDA
 biological_processGO:0036466 synaptic vesicle recycling via endosome IEA
 biological_processGO:0043065 positive regulation of apoptotic process IMP
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0043653 mitochondrial fragmentation involved in apoptotic process IMP
 biological_processGO:0048312 intracellular distribution of mitochondria IMP
 biological_processGO:0050714 positive regulation of protein secretion IDA
 biological_processGO:0051259 protein complex oligomerization IMP
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0051289 protein homotetramerization IDA
 biological_processGO:0061003 positive regulation of dendritic spine morphogenesis IEA
 biological_processGO:0061025 membrane fusion IDA
 biological_processGO:0070266 necroptotic process IMP
 biological_processGO:0070584 mitochondrion morphogenesis IMP
 biological_processGO:0071396 cellular response to lipid IEA
 biological_processGO:0090141 positive regulation of mitochondrial fission TAS
 biological_processGO:0090149 mitochondrial membrane fission IDA
 biological_processGO:0090200 positive regulation of release of cytochrome c from mitochondria IMP
 biological_processGO:0090650 cellular response to oxygen-glucose deprivation IEA
 biological_processGO:0097194 execution phase of apoptosis TAS
 biological_processGO:1900063 regulation of peroxisome organization IMP
 biological_processGO:1900244 positive regulation of synaptic vesicle endocytosis IEA
 biological_processGO:1903146 regulation of autophagy of mitochondrion IGI
 biological_processGO:1904579 cellular response to thapsigargin IEA
 biological_processGO:1905395 response to flavonoid IEA
 biological_processGO:1990910 response to hypobaric hypoxia IEA
 biological_processGO:2000302 positive regulation of synaptic vesicle exocytosis IEA
 biological_processGO:2001244 positive regulation of intrinsic apoptotic signaling pathway IMP
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane TAS
 cellular_componentGO:0005777 peroxisome IMP
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IMP
 cellular_componentGO:0005874 microtubule IDA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031966 mitochondrial membrane IEA
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 cellular_componentGO:0098794 postsynapse IEA
 cellular_componentGO:0099073 mitochondrion-derived vesicle IDA
 cellular_componentGO:0099503 secretory vesicle IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IDA
 molecular_functionGO:0005096 GTPase activator activity IC
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0008017 microtubule binding IBA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IDA
 molecular_functionGO:0030276 clathrin binding IEA
 molecular_functionGO:0030742 GTP-dependent protein binding IDA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0051433 BH2 domain binding IEA


Pathways (from Reactome)
Pathway description
Apoptotic execution phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000307 Pointed chin 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000490 Deep set eyes 
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 HP:0000552 Blue-yellow dyschromatopsia 
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 HP:0000603 Central scotoma 
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 HP:0000648 Optic atrophy 
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 HP:0000657 Oculomotor apraxia 
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 HP:0000666 Nystagmus, horizontal 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001508 Failure to thrive 
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 HP:0001522 Death in infancy 
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0002059 Cerebral atrophy 
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 HP:0002133 Status epilepticus 
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003676 Progressive disorder 
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 HP:0003828 Variable expressivity 
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 HP:0007256 Mild pyramidal signs 
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 HP:0007924 Slow decrease in visual acuity 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0200134 Epileptic encephalopathy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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