Manteia

ENSDARG00000016868

Danio rerio

Features

Gene ID:	ENSDARG00000016868

Biological name :	rhobtb2a

Synonyms :	rhobtb2a / Rho-related BTB domain containing 2a

Possible biological names infered from orthology :

Species:	Danio rerio

Chr. number:	5
Strand:	1
Band:
Gene start:	43427841
Gene end:	43502675

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000103939 Ensembl peptide - ENSDARP00000051113 Ensembl peptide - ENSDARP00000144243 NCBI entrez gene - 553415 See in Manteia. RefSeq - NM_001099974 RefSeq - XM_005165313 RefSeq Peptide - NP_001093444 swissprot - F1RD19 swissprot - A2BI17 ZFIN ID - ZDB-GENE-060315-11 Ensembl - ENSDARG00000016868

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name

Species

No match

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rhobtb2b / Rho-related BTB domain containing 2b	ENSDARG00000089340	66
rhobtb1 / Rho-related BTB domain containing 1 / O94844*	ENSDARG00000079468	65
si:dkey-263f15.2	ENSDARG00000074828	48
CABZ01060030.1	ENSDARG00000106579	14
rac1a / Rac family small GTPase 1a / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000074849	13
rac1b / Rac family small GTPase 1b / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000087954	12
rac3b / Rac family small GTPase 3b / RAC3* / P60764* / P60763* / Rac family small GTPase 3* / RAS-related C3 botulinum substrate 3*	ENSDARG00000020795	12
rac2 / Rac family small GTPase 2 / P15153* / Q05144* / Ras-related C3 botulinum toxin substrate 2 *	ENSDARG00000038010	12
rac3a / Rac family small GTPase 3a / RAC3* / P60763* / Rac family small GTPase 3*	ENSDARG00000090062	12
si:ch211-1f22.1 / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000013203	12
rhogb / ras homolog family member Gb / RHOG* / P84095* / P84096* / ras homolog family member G*	ENSDARG00000004301	11
rhoq / ras homolog family member Q / P17081* / Q8R527* / Rho-related GTP-binding protein RhoQ *	ENSDARG00000025953	11
rhoua / ras homolog family member Ua / RHOU* / Q9EQT3* / Q7L0Q8* / ras homolog family member U* / Rho-related GTP-binding protein RhoU *	ENSDARG00000019709	11
rhogc / ras homolog gene family, member Gc	ENSDARG00000028401	11
cdc42 / cell division cycle 42 / P60766* / P60953* / Cell division control *	ENSDARG00000044573	11
rhoub / ras homolog family member Ub	ENSDARG00000012968	11
rhogd / ras homolog gene family, member Gd	ENSDARG00000030608	11
rac1l / Rac family small GTPase 1, like / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000054649	11
cdc42l / cell division cycle 42, like	ENSDARG00000040158	11
rac1l / si:ch73-94k4.2 / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000096549	10

Protein motifs (from Interpro)

Interpro ID	Name
IPR000210	BTB/POZ domain
IPR001806	Small GTPase superfamily
IPR003578	Small GTPase superfamily, Rho type
IPR011333	SKP1/BTB/POZ domain superfamily
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007264	small GTPase mediated signal transduction	IEA
cellular_component	GO:0005622	intracellular	IEA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0003924	GTPase activity	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr