Manteia

ENSDARG00000005626

Danio rerio

Features

Gene ID:	ENSDARG00000005626

Biological name :	RHOU (1 of many)

Synonyms :	RHOU (1 of many) / si:ch211-133l11.10

Possible biological names infered from orthology :	Q7L0Q8 / Q9EQT3 / ras homolog family member U / Rho-related GTP-binding protein RhoU / RHOU

Species:	Danio rerio

Chr. number:	1
Strand:	-1
Band:
Gene start:	53980120
Gene end:	53988017

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000019782 Ensembl peptide - ENSDARP00000132697 Ensembl peptide - ENSDARP00000139507 NCBI entrez gene - 555552 See in Manteia. swissprot - A0A0R4IH78 swissprot - E7F7Z2 ZFIN ID - ZDB-GENE-141219-14 Ensembl - ENSDARG00000005626

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
	ENSGALG00000025738	Gallus gallus
RHOU	ENSG00000116574	Homo sapiens
Rhou	ENSMUSG00000039960	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rhoua / ras homolog family member Ua / RHOU* / Q9EQT3* / Q7L0Q8* / ras homolog family member U* / Rho-related GTP-binding protein RhoU *	ENSDARG00000019709	60
rhoub / ras homolog family member Ub	ENSDARG00000012968	54
rhov / ras homolog family member V / Q8VDU1* / Q96L33* / Rho-related GTP-binding protein RhoV *	ENSDARG00000070434	44
cdc42 / cell division cycle 42 / P60766* / P60953* / Cell division control *	ENSDARG00000044573	41
rac1a / Rac family small GTPase 1a / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000074849	39
cdc42l / cell division cycle 42, like	ENSDARG00000040158	39
rac3a / Rac family small GTPase 3a / RAC3* / P60763* / Rac family small GTPase 3*	ENSDARG00000090062	39
rac1b / Rac family small GTPase 1b / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000087954	39
rac3b / Rac family small GTPase 3b / RAC3* / P60764* / P60763* / Rac family small GTPase 3* / RAS-related C3 botulinum substrate 3*	ENSDARG00000020795	39
rac2 / Rac family small GTPase 2 / P15153* / Q05144* / Ras-related C3 botulinum toxin substrate 2 *	ENSDARG00000038010	38
cdc42l2 / cell division cycle 42 like 2	ENSDARG00000057869	37
rhoj / ras homolog family member J / Q9ER71* / Q9H4E5*	ENSDARG00000020250	37
rhogc / ras homolog gene family, member Gc	ENSDARG00000028401	36
rhoga / ras homolog family member Ga / RHOG* / P84095* / P84096* / ras homolog family member G*	ENSDARG00000068653	36
rhogb / ras homolog family member Gb / RHOG* / P84095* / P84096* / ras homolog family member G*	ENSDARG00000004301	35
rhoq / ras homolog family member Q / P17081* / Q8R527* / Rho-related GTP-binding protein RhoQ *	ENSDARG00000025953	35
rhogd / ras homolog gene family, member Gd	ENSDARG00000030608	35
rac1l / Rac family small GTPase 1, like / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000054649	33
si:ch211-1f22.1 / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000013203	33
si:ch211-1f22.2 / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000096666	32

Protein motifs (from Interpro)

Interpro ID	Name
IPR001806	Small GTPase superfamily
IPR003578	Small GTPase superfamily, Rho type
IPR005225	Small GTP-binding protein domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007264	small GTPase mediated signal transduction	IEA
cellular_component	GO:0005622	intracellular	IEA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0003924	GTPase activity	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

Rho GTPase cycle

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr