Manteia

ENSDARG00000070434

Danio rerio

Features

Gene ID:	ENSDARG00000070434

Biological name :	rhov

Synonyms :	ras homolog family member V / rhov

Possible biological names infered from orthology :	Q8VDU1 / Q96L33 / Rho-related GTP-binding protein RhoV

Species:	Danio rerio

Chr. number:	20
Strand:	1
Band:
Gene start:	28364742
Gene end:	28368137

Corresponding Affymetrix probe sets:	Dr.13114.1.A1_at (Zebrafish Array) Dr.13114.2.S1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000094132 NCBI entrez gene - 100005849 See in Manteia. RefSeq - NM_001012250 RefSeq Peptide - NP_001012250 swissprot - Q5YLG6 ZFIN ID - ZDB-GENE-031002-10 Ensembl - ENSDARG00000070434

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
RHOV	ENSGALG00000028047	Gallus gallus
RHOV	ENSG00000104140	Homo sapiens
Rhov	ENSMUSG00000034226	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rhoub / ras homolog family member Ub	ENSDARG00000012968	53
rhoua / ras homolog family member Ua / RHOU* / Q9EQT3* / Q7L0Q8* / ras homolog family member U* / Rho-related GTP-binding protein RhoU *	ENSDARG00000019709	52
RHOU (1 of many) / si:ch211-133l11.10 / RHOU* / Q9EQT3* / Q7L0Q8* / ras homolog family member U* / Rho-related GTP-binding protein RhoU *	ENSDARG00000005626	47
cdc42l / cell division cycle 42, like	ENSDARG00000040158	40
cdc42 / cell division cycle 42 / P60766* / P60953* / Cell division control *	ENSDARG00000044573	40
rac3b / Rac family small GTPase 3b / RAC3* / P60764* / P60763* / Rac family small GTPase 3* / RAS-related C3 botulinum substrate 3*	ENSDARG00000020795	39
rac3a / Rac family small GTPase 3a / RAC3* / P60763* / Rac family small GTPase 3*	ENSDARG00000090062	39
rac1b / Rac family small GTPase 1b / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000087954	39
rac2 / Rac family small GTPase 2 / P15153* / Q05144* / Ras-related C3 botulinum toxin substrate 2 *	ENSDARG00000038010	39
rac1a / Rac family small GTPase 1a / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000074849	38
rhoq / ras homolog family member Q / P17081* / Q8R527* / Rho-related GTP-binding protein RhoQ *	ENSDARG00000025953	38
si:ch211-1f22.2 / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000096666	37
cdc42l2 / cell division cycle 42 like 2	ENSDARG00000057869	37
rhoj / ras homolog family member J / Q9ER71* / Q9H4E5*	ENSDARG00000020250	37
rhogb / ras homolog family member Gb / RHOG* / P84095* / P84096* / ras homolog family member G*	ENSDARG00000004301	36
rac1l / Rac family small GTPase 1, like / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000054649	36
si:ch211-1f22.1 / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*	ENSDARG00000013203	36
rhogc / ras homolog gene family, member Gc	ENSDARG00000028401	35
rhoga / ras homolog family member Ga / RHOG* / P84095* / P84096* / ras homolog family member G*	ENSDARG00000068653	35
rhogd / ras homolog gene family, member Gd	ENSDARG00000030608	34

Protein motifs (from Interpro)

Interpro ID	Name
IPR001806	Small GTPase superfamily
IPR003578	Small GTPase superfamily, Rho type
IPR005225	Small GTP-binding protein domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007264	small GTPase mediated signal transduction	IEA
biological_process	GO:0055113	epiboly involved in gastrulation with mouth forming second	IMP
biological_process	GO:0071896	protein localization to adherens junction	IMP
cellular_component	GO:0005622	intracellular	IEA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0003924	GTPase activity	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

Rho GTPase cycle

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0000086	EVL	EVL cell-cell adherens junction structure , abnormal	Show
ZFA:0000711	DEL	DEL position , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr