ENSDARG00000017400


Danio rerio

Features
Gene ID: ENSDARG00000017400
  
Biological name :klf1
  
Synonyms : klf1 / Kruppel-like factor 1 (erythroid)
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 8129543
Gene end: 8140958
  
Corresponding Affymetrix probe sets: Dr.12569.1.S1_at (Zebrafish Array)   NM_130936_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000020778
NCBI entrez gene - 30104     See in Manteia.
RefSeq - NM_130936
RefSeq Peptide - NP_571011
swissprot - Q90XE6
ZFIN ID - ZDB-GENE-980526-55
Ensembl - ENSDARG00000017400
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
klf2b / Kruppel-like factor 2b / KLF1* / KLF2* / Q9Y5W3* / Q13351* / Kruppel like factor 1* / Kruppel like factor 2*ENSDARG0000004043229
klf2a / Kruppel-like factor 2a / KLF1* / KLF2* / Q9Y5W3* / Q13351* / Q60843* / Kruppel like factor 2* / Kruppel like factor 1* / Krueppel-like factor 2 *ENSDARG0000004266729
klf17 / Kruppel-like factor 17ENSDARG0000003879229
klf15 / Kruppel-like factor 15 / Q9EPW2* / Q9UIH9* / Krueppel-like factor 15 *ENSDARG0000009112727
klf5a / pibf1 / Kruppel-like factor 5a / KLF5* / Q9Z0Z7* / Q13887* / Kruppel like factor 5* / Krueppel-like factor 5 *ENSDARG0000001550627
klf12b / Kruppel-like factor 12b / KLF12* / Q9Y4X4* / O35738* / Kruppel like factor 12* / Krueppel-like factor 12 *ENSDARG0000003219725
klf5b / Kruppel-like factor 5b / KLF5* / Q9Z0Z7* / Q13887* / Kruppel like factor 5* / Krueppel-like factor 5 *ENSDARG0000006210625
klf12a / Kruppel-like factor 12aENSDARG0000001531225
klf7b / Kruppel-like factor 7b / KLF7* / Q99JB0* / O75840* / Kruppel like factor 7* / Krueppel-like factor 7 *ENSDARG0000004382124
klf8 / Kruppel-like factor 8 / O95600* / Q8BLM0* / Krueppel-like factor 8 *ENSDARG0000006066124
klf7a / Kruppel-like factor 7a / KLF7* / Q99JB0* / O75840* / Kruppel like factor 7* / Krueppel-like factor 7 *ENSDARG0000007385724
klf6a / Kruppel-like factor 6a / KLF6* / Q99612* / Kruppel like factor 6*ENSDARG0000002907224
si:ch211-117k10.3ENSDARG0000009091423
klf5l / Kruppel-like factor 5 likeENSDARG0000001875723
klf3 / Kruppel-like factor 3 (basic) / P57682* / Q60980* / Kruppel like factor 3* / Krueppel-like factor 3 *ENSDARG0000001549522
klf6b / Kruppel-like factor 6bENSDARG0000003856120
klf4 / Kruppel-like factor 4 / O43474*ENSDARG0000007992216


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010628 positive regulation of gene expression IMP
 biological_processGO:0060319 primitive erythrocyte differentiation IEP
 cellular_componentGO:0005634 nucleus IC
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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