ENSDARG00000040432


Danio rerio

Features
Gene ID: ENSDARG00000040432
  
Biological name :klf2b
  
Synonyms : klf2b / Kruppel-like factor 2b
  
Possible biological names infered from orthology : KLF1 / KLF2 / Krueppel-like factor 2 / Kruppel like factor 1 / Kruppel like factor 2 / Q13351 / Q60843 / Q9Y5W3
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 55665095
Gene end: 55673225
  
Corresponding Affymetrix probe sets: Dr.9976.1.S1_at (Zebrafish Array)   NM_131857_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059187
Ensembl peptide - ENSDARP00000147221
Ensembl peptide - ENSDARP00000154137
NCBI entrez gene - 117509     See in Manteia.
RefSeq - NM_131857
RefSeq Peptide - NP_571932
swissprot - Q90XE7
ZFIN ID - ZDB-GENE-011109-2
Ensembl - ENSDARG00000040432
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000010101Gallus gallus
 KLF1ENSG00000105610Homo sapiens
 KLF2ENSG00000127528Homo sapiens
 Klf1ENSMUSG00000054191Mus musculus
 Klf2ENSMUSG00000055148Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
klf2a / Kruppel-like factor 2a / KLF1* / KLF2* / Q9Y5W3* / Q13351* / Q60843* / Kruppel like factor 2* / Kruppel like factor 1* / Krueppel-like factor 2 *ENSDARG0000004266757
klf17 / Kruppel-like factor 17ENSDARG0000003879245
klf1 / Kruppel-like factor 1 (erythroid)ENSDARG0000001740029
klf5a / pibf1 / Kruppel-like factor 5a / KLF5* / Q9Z0Z7* / Q13887* / Kruppel like factor 5* / Krueppel-like factor 5 *ENSDARG0000001550627
klf4 / Kruppel-like factor 4 / O43474*ENSDARG0000007992227
klf5b / Kruppel-like factor 5b / KLF5* / Q9Z0Z7* / Q13887* / Kruppel like factor 5* / Krueppel-like factor 5 *ENSDARG0000006210626
klf7b / Kruppel-like factor 7b / KLF7* / Q99JB0* / O75840* / Kruppel like factor 7* / Krueppel-like factor 7 *ENSDARG0000004382125
klf6a / Kruppel-like factor 6a / KLF6* / Q99612* / Kruppel like factor 6*ENSDARG0000002907225
klf5l / Kruppel-like factor 5 likeENSDARG0000001875725
klf12a / Kruppel-like factor 12aENSDARG0000001531224
klf12b / Kruppel-like factor 12b / KLF12* / Q9Y4X4* / O35738* / Kruppel like factor 12* / Krueppel-like factor 12 *ENSDARG0000003219724
klf3 / Kruppel-like factor 3 (basic) / P57682* / Q60980* / Kruppel like factor 3* / Krueppel-like factor 3 *ENSDARG0000001549523
klf7a / Kruppel-like factor 7a / KLF7* / Q99JB0* / O75840* / Kruppel like factor 7* / Krueppel-like factor 7 *ENSDARG0000007385723
klf8 / Kruppel-like factor 8 / O95600* / Q8BLM0* / Krueppel-like factor 8 *ENSDARG0000006066122
klf6b / Kruppel-like factor 6bENSDARG0000003856121
klf15 / Kruppel-like factor 15 / Q9EPW2* / Q9UIH9* / Krueppel-like factor 15 *ENSDARG0000009112720
si:ch211-117k10.3ENSDARG0000009091419


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042662 negative regulation of mesodermal cell fate specification IGI
 biological_processGO:0042665 regulation of ectodermal cell fate specification IGI
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000038 margin margin presumptive mesoderm differentiated , abnormal
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 ZFA:0001094 whole organism whole organism decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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