ENSDARG00000015495


Danio rerio

Features
Gene ID: ENSDARG00000015495
  
Biological name :klf3
  
Synonyms : klf3 / Kruppel-like factor 3 (basic)
  
Possible biological names infered from orthology : Krueppel-like factor 3 / Kruppel like factor 3 / P57682 / Q60980
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 18594146
Gene end: 18615063
  
Corresponding Affymetrix probe sets: Dr.12593.1.S1_at (Zebrafish Array)   NM_131859_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000015473
NCBI entrez gene - 117603     See in Manteia.
RefSeq - NM_131859
RefSeq - XM_017356404
RefSeq Peptide - NP_571934
swissprot - A2BG67
ZFIN ID - ZDB-GENE-011116-1
Ensembl - ENSDARG00000015495
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KLF3ENSGALG00000041717Gallus gallus
 KLF3ENSG00000109787Homo sapiens
 Klf3ENSMUSG00000029178Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
klf12b / Kruppel-like factor 12b / KLF12* / Q9Y4X4* / O35738* / Kruppel like factor 12* / Krueppel-like factor 12 *ENSDARG0000003219742
klf12a / Kruppel-like factor 12aENSDARG0000001531239
klf8 / Kruppel-like factor 8 / O95600* / Q8BLM0* / Krueppel-like factor 8 *ENSDARG0000006066135
klf5a / pibf1 / Kruppel-like factor 5a / KLF5* / Q9Z0Z7* / Q13887* / Kruppel like factor 5* / Krueppel-like factor 5 *ENSDARG0000001550628
klf5b / Kruppel-like factor 5b / KLF5* / Q9Z0Z7* / Q13887* / Kruppel like factor 5* / Krueppel-like factor 5 *ENSDARG0000006210628
klf5l / Kruppel-like factor 5 likeENSDARG0000001875727
klf7a / Kruppel-like factor 7a / KLF7* / Q99JB0* / O75840* / Kruppel like factor 7* / Krueppel-like factor 7 *ENSDARG0000007385726
klf6a / Kruppel-like factor 6a / KLF6* / Q99612* / Kruppel like factor 6*ENSDARG0000002907225
klf2b / Kruppel-like factor 2b / KLF1* / KLF2* / Q9Y5W3* / Q13351* / Kruppel like factor 1* / Kruppel like factor 2*ENSDARG0000004043225
klf17 / Kruppel-like factor 17ENSDARG0000003879225
klf7b / Kruppel-like factor 7b / KLF7* / Q99JB0* / O75840* / Kruppel like factor 7* / Krueppel-like factor 7 *ENSDARG0000004382125
klf2a / Kruppel-like factor 2a / KLF1* / KLF2* / Q9Y5W3* / Q13351* / Q60843* / Kruppel like factor 2* / Kruppel like factor 1* / Krueppel-like factor 2 *ENSDARG0000004266724
klf1 / Kruppel-like factor 1 (erythroid)ENSDARG0000001740024
klf15 / Kruppel-like factor 15 / Q9EPW2* / Q9UIH9* / Krueppel-like factor 15 *ENSDARG0000009112723
si:ch211-117k10.3ENSDARG0000009091421
klf6b / Kruppel-like factor 6bENSDARG0000003856121
klf4 / Kruppel-like factor 4 / O43474*ENSDARG0000007992212


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0043249 erythrocyte maturation IMP
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003682 chromatin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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