ENSDARG00000020759


Danio rerio

Features
Gene ID: ENSDARG00000020759
  
Biological name :elf1
  
Synonyms : E74-like ETS transcription factor 1 / elf1
  
Possible biological names infered from orthology : E74 like ETS transcription factor 4 / ELF4 / ETS-related transcription factor Elf-4 / Q99607 / Q9Z2U4
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 40745833
Gene end: 40850481
  
Corresponding Affymetrix probe sets: Dr.981.1.S1_at (Zebrafish Array)   NM_131159_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000107670
Ensembl peptide - ENSDARP00000142263
Ensembl peptide - ENSDARP00000133548
NCBI entrez gene - 30396     See in Manteia.
RefSeq - NM_131159
RefSeq - XM_017358977
RefSeq - XM_017358978
RefSeq - XM_017358979
RefSeq - XM_017358980
RefSeq Peptide - NP_571234
swissprot - E7F1J0
swissprot - A0A140LG85
swissprot - A0A0R4IFE7
ZFIN ID - ZDB-GENE-980526-335
Ensembl - ENSDARG00000020759
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELF4ENSG00000102034Homo sapiens
 Elf4ENSMUSG00000031103Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
elf2b / E74-like factor 2b (ets domain transcription factor) / ELF2* / Q15723* / E74 like ETS transcription factor 2*ENSDARG0000007962629
elf2a / E74-like factor 2a (ets domain transcription factor) / ELF2* / Q9JHC9* / Q15723* / E74 like ETS transcription factor 2* / ETS-related transcription factor Elf-2 *ENSDARG0000001945928
ehf / ets homologous factor / O70273* / Q9NZC4*ENSDARG000000521159
SPDEF / SAM pointed domain containing ETS transcription factor / O95238*ENSDARG000000299309
elf3 / E74-like factor 3 (ets domain transcription factor, epithelial-specific ) / P78545* / Q3UPW2* / E74 like ETS transcription factor 3* / ETS-related transcription factor Elf-3 *ENSDARG000000779829
etv7 / ets variant 7 / Q9Y603*ENSDARG000000894349


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR022084  Transcription factor Elf, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001787 natural killer cell proliferation IEA
 biological_processGO:0001866 NK T cell proliferation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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