ENSDARG00000077982


Danio rerio

Features
Gene ID: ENSDARG00000077982
  
Biological name :elf3
  
Synonyms : E74-like factor 3 (ets domain transcription factor, epithelial-specific ) / elf3
  
Possible biological names infered from orthology : E74 like ETS transcription factor 3 / ETS-related transcription factor Elf-3 / P78545 / Q3UPW2
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 661505
Gene end: 665371
  
Corresponding Affymetrix probe sets: Dr.1909.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124484
Ensembl peptide - ENSDARP00000101728
NCBI entrez gene - 560869     See in Manteia.
RefSeq - XM_002666100
swissprot - F8W364
swissprot - E7FB26
ZFIN ID - ZDB-GENE-030131-8760
Ensembl - ENSDARG00000077982
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELF3ENSGALG00000000616Gallus gallus
 ELF3ENSG00000163435Homo sapiens
 Elf3ENSMUSG00000003051Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ehf / ets homologous factor / O70273* / Q9NZC4*ENSDARG0000005211530
elf2b / E74-like factor 2b (ets domain transcription factor) / ELF2* / Q15723* / E74 like ETS transcription factor 2*ENSDARG0000007962616
etv7 / ets variant 7 / Q9Y603*ENSDARG0000008943414
elf2a / E74-like factor 2a (ets domain transcription factor) / ELF2* / Q9JHC9* / Q15723* / E74 like ETS transcription factor 2* / ETS-related transcription factor Elf-2 *ENSDARG0000001945914
SPDEF / SAM pointed domain containing ETS transcription factor / O95238*ENSDARG0000002993013
elf1 / E74-like ETS transcription factor 1 / ELF4* / Q99607* / Q9Z2U4* / E74 like ETS transcription factor 4* / ETS-related transcription factor Elf-4 *ENSDARG0000002075913


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR003118  Pointed domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR033074  ETS-related transcription factor Elf-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0030855 epithelial cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
Pre-NOTCH Transcription and Translation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000021225 prkci / Q90XF2 / protein kinase C, iota / P41743* / Q62074*  / reaction






 

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