ENSDARG00000052115


Danio rerio

Features
Gene ID: ENSDARG00000052115
  
Biological name :ehf
  
Synonyms : ehf / ets homologous factor
  
Possible biological names infered from orthology : O70273 / Q9NZC4
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 10410620
Gene end: 10436906
  
Corresponding Affymetrix probe sets: Dr.14187.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000068397
Ensembl peptide - ENSDARP00000126541
NCBI entrez gene - 568223     See in Manteia.
RefSeq - NM_001039822
RefSeq - XM_005162989
RefSeq Peptide - NP_001034911
swissprot - Q29R87
swissprot - K7DYL2
ZFIN ID - ZDB-GENE-060312-7
Ensembl - ENSDARG00000052115
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EHFENSGALG00000007817Gallus gallus
 EHFENSG00000135373Homo sapiens
 EhfENSMUSG00000012350Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
elf3 / E74-like factor 3 (ets domain transcription factor, epithelial-specific ) / P78545* / Q3UPW2* / E74 like ETS transcription factor 3* / ETS-related transcription factor Elf-3 *ENSDARG0000007798243
elf2b / E74-like factor 2b (ets domain transcription factor) / ELF2* / Q15723* / E74 like ETS transcription factor 2*ENSDARG0000007962621
etv7 / ets variant 7 / Q9Y603*ENSDARG0000008943420
SPDEF / SAM pointed domain containing ETS transcription factor / O95238*ENSDARG0000002993020
elf1 / E74-like ETS transcription factor 1 / ELF4* / Q99607* / Q9Z2U4* / E74 like ETS transcription factor 4* / ETS-related transcription factor Elf-4 *ENSDARG0000002075919
elf2a / E74-like factor 2a (ets domain transcription factor) / ELF2* / Q9JHC9* / Q15723* / E74 like ETS transcription factor 2* / ETS-related transcription factor Elf-2 *ENSDARG0000001945919


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR003118  Pointed domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR033071  ETS homologous factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0030855 epithelial cell differentiation IEA
 biological_processGO:0050673 epithelial cell proliferation IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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