ENSDARG00000020982


Danio rerio

Features
Gene ID: ENSDARG00000020982
  
Biological name :prickle2a
  
Synonyms : prickle2a / prickle homolog 2a
  
Possible biological names infered from orthology : PRICKLE2 / prickle planar cell polarity protein 2 / Q7Z3G6 / Q80Y24
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 54081819
Gene end: 54105734
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000012600
Ensembl peptide - ENSDARP00000139463
NCBI entrez gene - 777736     See in Manteia.
RefSeq - NM_001077783
RefSeq Peptide - NP_001071251
swissprot - B8JMK6
swissprot - A0JPE8
ZFIN ID - ZDB-GENE-061110-112
Ensembl - ENSDARG00000020982
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PRICKLE2ENSGALG00000007332Gallus gallus
 Q7Z3G6ENSG00000163637Homo sapiens
 Q80Y24ENSMUSG00000030020Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
prickle2b / prickle homolog 2b / Q7Z3G6* / Q80Y24* / PRICKLE2* / prickle planar cell polarity protein 2*ENSDARG0000003759358
prickle1a / prickle homolog 1a / Q96MT3* / Q3U5C7* / PRICKLE1* / Prickle-like protein 1 * / prickle planar cell polarity protein 1*ENSDARG0000004064938
prickle1b / prickle homolog 1b / Q96MT3* / Q3U5C7* / PRICKLE1* / Prickle-like protein 1 * / prickle planar cell polarity protein 1*ENSDARG0000004569438
prickle3 / prickle homolog 3 / O43900* / Q80VL3* / prickle planar cell polarity protein 3*ENSDARG0000007399630
tes / testis derived transcript (3 LIM domains) / Gm4985* / Q9UGI8* / Gm4907* / testin LIM domain protein* / testis derived transcript*ENSDARG0000005185714
lmcd1 / LIM and cysteine-rich domains 1 / Q8VEE1* / Q9NZU5*ENSDARG0000000200210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR010442  PET domain
 IPR033723  PET prickle
 IPR033725  LIM1 prickle
 IPR033726  LIM2 prickle
 IPR033727  LIM3 prickle


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr