ENSDARG00000051857


Danio rerio

Features
Gene ID: ENSDARG00000051857
  
Biological name :tes
  
Synonyms : tes / testis derived transcript (3 LIM domains)
  
Possible biological names infered from orthology : Gm4907 / Gm4985 / Q9UGI8 / testin LIM domain protein / testis derived transcript
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 18475032
Gene end: 18496410
  
Corresponding Affymetrix probe sets: Dr.25730.1.S1_at (Zebrafish Array)   NM_205720_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000068054
NCBI entrez gene - 403032     See in Manteia.
RefSeq - NM_205720
RefSeq Peptide - NP_991283
swissprot - F1QNJ3
ZFIN ID - ZDB-GENE-040718-59
Ensembl - ENSDARG00000051857
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TESENSGALG00000031934Gallus gallus
 TESENSG00000135269Homo sapiens
 Gm4907ENSMUSG00000068113Mus musculus
 Gm4985ENSMUSG00000090102Mus musculus
 TesENSMUSG00000029552Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lmcd1 / LIM and cysteine-rich domains 1 / Q8VEE1* / Q9NZU5*ENSDARG0000000200228
prickle3 / prickle homolog 3 / O43900* / Q80VL3* / prickle planar cell polarity protein 3*ENSDARG0000007399626
prickle1a / prickle homolog 1a / Q96MT3* / Q3U5C7* / PRICKLE1* / Prickle-like protein 1 * / prickle planar cell polarity protein 1*ENSDARG0000004064923
prickle2b / prickle homolog 2b / Q7Z3G6* / Q80Y24* / PRICKLE2* / prickle planar cell polarity protein 2*ENSDARG0000003759323
prickle1b / prickle homolog 1b / Q96MT3* / Q3U5C7* / PRICKLE1* / Prickle-like protein 1 * / prickle planar cell polarity protein 1*ENSDARG0000004569422
prickle2a / prickle homolog 2a / Q7Z3G6* / PRICKLE2* / prickle planar cell polarity protein 2*ENSDARG0000002098222


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR010442  PET domain
 IPR027683  Testin
 IPR033724  PET testin
 IPR034958  Testin, LIM domain 1
 IPR034959  Testin, LIM domain 2
 IPR034960  Testin, LIM domain 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042127 regulation of cell proliferation IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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