ENSDARG00000021287


Danio rerio

Features
Gene ID: ENSDARG00000021287
  
Biological name :zgc:91909
  
Synonyms : zgc:91909
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 50968990
Gene end: 50981175
  
Corresponding Affymetrix probe sets: Dr.23002.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000025539
Ensembl peptide - ENSDARP00000151696
Ensembl peptide - ENSDARP00000152242
NCBI entrez gene - 431725     See in Manteia.
RefSeq - XM_005167363
RefSeq - NM_001002178
RefSeq - XM_017357314
RefSeq - XM_017357313
RefSeq Peptide - NP_001002178
swissprot - Q6GQM5
ZFIN ID - ZDB-GENE-040704-16
Ensembl - ENSDARG00000021287
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:100918ENSDARG0000008724391
rab7 / RAB7, member RAS oncogene family / RAB7A* / P51150* / P51149* / RAB7A, member RAS oncogene family*ENSDARG0000002049790
rab9b / RAB9B, member RAS oncogene family / Q8BHH2* / Q9NP90*ENSDARG0000010339150
si:dkey-13a21.4ENSDARG0000002609850
rab9a / RAB9A, member RAS oncogene family / Rab9* / Q9R0M6* / P51151* / RAB9, member RAS oncogene family*ENSDARG0000004502750
rab38c / RAB38c, member of RAS oncogene familyENSDARG0000007471934
rab32a / RAB32a, member RAS oncogene family / RAB32* / Q9CZE3* / Q13637* / RAB32, member RAS oncogene family*ENSDARG0000002903633
rab32b / RAB32b, member RAS oncogene familyENSDARG0000004116532
rab23 / RAB23, member RAS oncogene family / Q9ULC3*ENSDARG0000000415131
rab38b / RAB38b, member of RAS oncogene family / RAB38* / P57729* / RAB38, member RAS oncogene family*ENSDARG0000011288931
zgc:162171ENSDARG0000003649929


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr