ENSDARG00000087243


Danio rerio

Features
Gene ID: ENSDARG00000087243
  
Biological name :zgc:100918
  
Synonyms : zgc:100918
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 42740862
Gene end: 42759918
  
Corresponding Affymetrix probe sets: Dr.25622.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103118
Ensembl peptide - ENSDARP00000111138
Ensembl peptide - ENSDARP00000148435
NCBI entrez gene - 449549     See in Manteia.
RefSeq - NM_001005591
RefSeq - XM_009305683
RefSeq Peptide - NP_001005591
swissprot - Q641M4
swissprot - F6NJU6
ZFIN ID - ZDB-GENE-040927-2
Ensembl - ENSDARG00000087243
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab7 / RAB7, member RAS oncogene family / RAB7A* / P51150* / P51149* / RAB7A, member RAS oncogene family*ENSDARG0000002049790
zgc:91909ENSDARG0000002128789
rab9a / RAB9A, member RAS oncogene family / Rab9* / Q9R0M6* / P51151* / RAB9, member RAS oncogene family*ENSDARG0000004502749
si:dkey-13a21.4ENSDARG0000002609849
rab9b / RAB9B, member RAS oncogene family / Q8BHH2* / Q9NP90*ENSDARG0000010339149
rab32a / RAB32a, member RAS oncogene family / RAB32* / Q9CZE3* / Q13637* / RAB32, member RAS oncogene family*ENSDARG0000002903633
rab38c / RAB38c, member of RAS oncogene familyENSDARG0000007471932
rab32b / RAB32b, member RAS oncogene familyENSDARG0000004116531
rab23 / RAB23, member RAS oncogene family / Q9ULC3*ENSDARG0000000415131
zgc:162171ENSDARG0000003649930
rab38b / RAB38b, member of RAS oncogene family / RAB38* / P57729* / RAB38, member RAS oncogene family*ENSDARG0000011288929


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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