ENSDARG00000112889


Danio rerio

Features
Gene ID: ENSDARG00000112889
  
Biological name :rab38b
  
Synonyms : rab38b / RAB38b, member of RAS oncogene family
  
Possible biological names infered from orthology : P57729 / Q8QZZ8 / RAB38 / RAB38, member RAS oncogene family
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 25272355
Gene end: 25283609
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000118617
NCBI entrez gene - 100007788     See in Manteia.
swissprot - F1QB15
ZFIN ID - ZDB-GENE-091204-345
Ensembl - ENSDARG00000112889
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAB38ENSGALG00000028018Gallus gallus
 RAB38ENSG00000123892Homo sapiens
 Rab38ENSMUSG00000030559Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab38c / RAB38c, member of RAS oncogene familyENSDARG0000007471965
rab32a / RAB32a, member RAS oncogene family / RAB32* / Q9CZE3* / Q13637* / RAB32, member RAS oncogene family*ENSDARG0000002903661
zgc:162171ENSDARG0000003649961
rab32b / RAB32b, member RAS oncogene familyENSDARG0000004116542
si:dkey-13a21.4ENSDARG0000002609830
rab7 / RAB7, member RAS oncogene family / RAB7A* / P51150* / P51149* / RAB7A, member RAS oncogene family*ENSDARG0000002049730
zgc:91909ENSDARG0000002128730
rab9b / RAB9B, member RAS oncogene family / Q8BHH2* / Q9NP90*ENSDARG0000010339129
rab23 / RAB23, member RAS oncogene family / Q9ULC3*ENSDARG0000000415129
rab9a / RAB9A, member RAS oncogene family / Rab9* / Q9R0M6* / P51151* / RAB9, member RAS oncogene family*ENSDARG0000004502729
zgc:100918ENSDARG0000008724329


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030697  Ras-related protein Rab29/Rab38/Rab32


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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