ENSDARG00000074719


Danio rerio

Features
Gene ID: ENSDARG00000074719
  
Biological name :rab38c
  
Synonyms : rab38c / RAB38c, member of RAS oncogene family
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 30549512
Gene end: 30560490
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115732
NCBI entrez gene - 562524     See in Manteia.
swissprot - E9QJH8
ZFIN ID - ZDB-GENE-091118-91
Ensembl - ENSDARG00000074719
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:162171ENSDARG0000003649969
rab38b / RAB38b, member of RAS oncogene family / RAB38* / P57729* / RAB38, member RAS oncogene family*ENSDARG0000011288964
rab32a / RAB32a, member RAS oncogene family / RAB32* / Q9CZE3* / Q13637* / RAB32, member RAS oncogene family*ENSDARG0000002903662
rab32b / RAB32b, member RAS oncogene familyENSDARG0000004116546
rab9b / RAB9B, member RAS oncogene family / Q8BHH2* / Q9NP90*ENSDARG0000010339134
rab9a / RAB9A, member RAS oncogene family / Rab9* / Q9R0M6* / P51151* / RAB9, member RAS oncogene family*ENSDARG0000004502733
rab7 / RAB7, member RAS oncogene family / RAB7A* / P51150* / P51149* / RAB7A, member RAS oncogene family*ENSDARG0000002049732
zgc:91909ENSDARG0000002128732
zgc:100918ENSDARG0000008724331
si:dkey-13a21.4ENSDARG0000002609831
rab23 / RAB23, member RAS oncogene family / Q9ULC3*ENSDARG0000000415130


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030697  Ras-related protein Rab29/Rab38/Rab32


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0031982 vesicle IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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