ENSDARG00000023272


Danio rerio

Features
Gene ID: ENSDARG00000023272
  
Biological name :tfap2d
  
Synonyms : Q5RJ20 / tfap2d / transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
  
Possible biological names infered from orthology : Q7Z6R9 / Q91ZK0 / transcription factor AP-2 delta
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 47717389
Gene end: 47732703
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000028710
Ensembl peptide - ENSDARP00000153448
NCBI entrez gene - 566838     See in Manteia.
RefSeq - NM_001025546
RefSeq Peptide - NP_001020717
swissprot - Q5RJ20
ZFIN ID - ZDB-GENE-050913-99
Ensembl - ENSDARG00000023272
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TFAP2DENSGALG00000019842Gallus gallus
 Q7Z6R9ENSG00000008197Homo sapiens
 Q91ZK0ENSMUSG00000042596Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tfap2b / transcription factor AP-2 beta / Q92481*ENSDARG0000001266748
tfap2a / transcription factor AP-2 alpha / P05549*ENSDARG0000005927946
tfap2e / transcription factor AP-2 epsilon / Q6VUC0* / Q6VUP9*ENSDARG0000000886144
tfap2c / transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) / Q61312* / Q92754* / transcription factor AP-2 gamma*ENSDARG0000004060643


Protein motifs (from Interpro)
Interpro ID Name
 IPR004979  Transcription factor AP-2
 IPR013854  Transcription factor AP-2, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0048856 anatomical structure development IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
Negative regulation of activity of TFAP2 (AP-2) family transcription factors
Activation of the TFAP2 (AP-2) family of transcription factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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