ENSGALG00000019842


Gallus gallus

Features
Gene ID: ENSGALG00000019842
  
Biological name :TFAP2D
  
Synonyms : TFAP2D / transcription factor AP-2-delta
  
Possible biological names infered from orthology : Q7Z6R9 / Q91ZK0
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 108736673
Gene end: 108786566
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000030899
Ensembl peptide - ENSGALP00000047464
NCBI entrez gene - 771525     See in Manteia.
RefSeq - XM_015285154
RefSeq - NM_001135785
RefSeq - XM_015285152
RefSeq - XM_015285153
RefSeq Peptide - NP_001129257
swissprot - E1C135
swissprot - A0A1D5P457
Ensembl - ENSGALG00000019842
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5RJ20ENSDARG00000023272Danio rerio
 Q7Z6R9ENSG00000008197Homo sapiens
 Q91ZK0ENSMUSG00000042596Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TFAP2B / transcription factor AP-2-beta / Q61313* / Q92481*ENSGALG0000001668047
TFAP2A / transcription factor AP-2-alpha / P05549*ENSGALG0000001277547
TFAP2C / transcription factor AP-2 gamma / Q61312* / Q92754*ENSGALG0000000769046
TFAP2E / transcription factor AP-2 epsilon / Q6VUC0* / Q6VUP9*ENSGALG0000003949745


Protein motifs (from Interpro)
Interpro ID Name
 IPR004979  Transcription factor AP-2
 IPR013854  Transcription factor AP-2, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048856 anatomical structure development IBA
 biological_processGO:0061379 inferior colliculus development IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
Negative regulation of activity of TFAP2 (AP-2) family transcription factors
Activation of the TFAP2 (AP-2) family of transcription factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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