ENSDARG00000024964


Danio rerio

Features
Gene ID: ENSDARG00000024964
  
Biological name :patj
  
Synonyms : patj / PATJ, crumbs cell polarity complex component
  
Possible biological names infered from orthology : Mus musculus PATJ, crumbs cell polarity complex component (Patj), transcript variant 5, mRNA. / Q63ZW7 / Q8NI35
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 16569123
Gene end: 16759151
  
Corresponding Affymetrix probe sets: Dr.20603.1.S1_at (Zebrafish Array)   Dr.20603.2.S1_at (Zebrafish Array)   Dr.9470.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122825
Ensembl peptide - ENSDARP00000157175
Ensembl peptide - ENSDARP00000035306
Ensembl peptide - ENSDARP00000116882
NCBI entrez gene - 368723     See in Manteia.
RefSeq - NM_001127185
RefSeq Peptide - NP_001120657
swissprot - A8DZE1
swissprot - Q1LXN3
ZFIN ID - ZDB-GENE-030616-129
Ensembl - ENSDARG00000024964
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000010934Gallus gallus
 ENSGALG00000038993Gallus gallus
 PATJENSG00000132849Homo sapiens
 PatjENSMUSG00000061859Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-92j12.5 / MPDZ* / Q8VBX6* / O75970* / multiple PDZ domain protein* / multiple PDZ domain crumbs cell polarity complex component*ENSDARG0000009467731
pdzd2 / PDZ domain containing 2 / O15018*ENSDARG0000005980111
pard3ab / par-3 family cell polarity regulator alpha, b / PARD3* / Q8TEW0* / Q99NH2* / par-3 family cell polarity regulator*ENSDARG000000105839
il16 / interleukin 16 / O54824* / Q14005* / Pro-interleukin-16 Interleukin-16*ENSDARG000001029089
lnx1 / ligand of numb-protein X 1 / O70263* / Q8TBB1*ENSDARG000000433237
lnx2a / ligand of numb-protein X 2a / LNX2* / Q8N448* / Q91XL2* / ligand of numb-protein X 2*ENSDARG000000291776
pard3ba / si:ch1073-345a8.1 / PARD3B* / Q8TEW8* / par-3 family cell polarity regulator beta*ENSDARG000000926716
lnx2b / ligand of numb-protein X 2bENSDARG000000714786
pard3bb / par-3 family cell polarity regulator beta b / PARD3B* / Q9CSB4* / Q8TEW8* / par-3 family cell polarity regulator beta*ENSDARG000000345555
PARD3 (1 of many) / par-3 family cell polarity regulator / PARD3* / Q8TEW0*ENSDARG000001108044
si:dkey-92i15.4ENSDARG000000783873


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR004172  L27 domain
 IPR015132  L27-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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