ENSDARG00000026482


Danio rerio

Features
Gene ID: ENSDARG00000026482
  
Biological name :arhgap12b
  
Synonyms : arhgap12b / Rho GTPase activating protein 12b
  
Possible biological names infered from orthology : ARHGAP12 / Q8C0D4 / Q8IWW6 / Rho GTPase activating protein 12
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 26621906
Gene end: 26726048
  
Corresponding Affymetrix probe sets: Dr.11928.1.A1_at (Zebrafish Array)   NM_200874_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000046958
Ensembl peptide - ENSDARP00000114978
Ensembl peptide - ENSDARP00000127178
Ensembl peptide - ENSDARP00000134177
Ensembl peptide - ENSDARP00000157652
NCBI entrez gene - 393848     See in Manteia.
RefSeq - XM_009306595
RefSeq - NM_200874
RefSeq Peptide - NP_957168
swissprot - F1QHS5
swissprot - A0A0R4IKK1
swissprot - F1R1Z3
swissprot - U3JAB3
ZFIN ID - ZDB-GENE-040426-1727
Ensembl - ENSDARG00000026482
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARHGAP12ENSGALG00000007254Gallus gallus
 Q8IWW6ENSG00000165322Homo sapiens
 Q8C0D4ENSMUSG00000041225Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arhgap12a / Rho GTPase activating protein 12a / Q8C0D4* / Q8IWW6* / ARHGAP12* / Rho GTPase activating protein 12*ENSDARG0000000854862
arhgap27l / Rho GTPase activating protein 27, like / A2AB59* / Q6ZUM4* / ARHGAP27* / Rho GTPase activating protein 27*ENSDARG0000006179836
arhgap27 / Rho GTPase activating protein 27 / A2AB59* / Q6ZUM4*ENSDARG0000010425536
arhgap15 / Rho GTPase activating protein 15 / Q53QZ3* / Q811M1*ENSDARG0000006234924
arhgap23a / Rho GTPase activating protein 23a / Q69ZH9* / Q9P227* / ARHGAP23* / Rho GTPase activating protein 23*ENSDARG0000005295021
arhgap21a / Rho GTPase activating protein 21a / Q5T5U3* / ARHGAP21* / Rho GTPase activating protein 21*ENSDARG0000010429521
arhgap21b / Rho GTPase activating protein 21b / Q5T5U3* / ARHGAP21* / Rho GTPase activating protein 21*ENSDARG0000007567320
bcr / breakpoint cluster region / P11274* / Q6PAJ1* / Breakpoint cluster region protein * / BCR, RhoGEF and GTPase activating protein*ENSDARG0000007928619
si:dkey-91m11.5 / BCR* / P11274* / Q6PAJ1* / Breakpoint cluster region protein * / BCR, RhoGEF and GTPase activating protein*ENSDARG0000004232919
arhgap23b / Rho GTPase activating protein 23b / Q69ZH9* / Q9P227* / ARHGAP23* / Rho GTPase activating protein 23*ENSDARG0000002684019
CABZ01088367.1 / Q9BRR9* / ARHGAP9* / Rho GTPase activating protein 9*ENSDARG0000001339016
chn1 / chimerin 1 / P15882*ENSDARG0000010173514
CABZ01078415.1ENSDARG0000007744014
chn2 / chimerin 2 / Q80XD1* / P52757* / AC004593.3* / Beta-chimaerin * / beta-chimaerin isoform 3 *ENSDARG0000001184514
si:dkey-33c9.6ENSDARG0000003642013
SYDE2 / synapse defective Rho GTPase homolog 2 / Q5VT97*ENSDARG0000009947912
abr / active BCR-related / Q12979* / Q5SSL4* / active BCR-related gene*ENSDARG0000009518010
CU928117.1ENSDARG000000595877


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR001202  WW domain
 IPR001452  SH3 domain
 IPR001849  Pleckstrin homology domain
 IPR008936  Rho GTPase activation protein
 IPR011993  PH-like domain superfamily
 IPR035491  ARHGAP12, SH3 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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