ENSDARG00000029439


Danio rerio

Features
Gene ID: ENSDARG00000029439
  
Biological name :atp2a2a
  
Synonyms : atp2a2a / ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a
  
Possible biological names infered from orthology : ATP2A2 / ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 / O55143 / P16615 / Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 11687254
Gene end: 11744994
  
Corresponding Affymetrix probe sets: Dr.16838.1.A1_at (Zebrafish Array)   Dr.6801.1.S1_at (Zebrafish Array)   NM_200965_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000042039
Ensembl peptide - ENSDARP00000113858
Ensembl peptide - ENSDARP00000112786
NCBI entrez gene - 393940     See in Manteia.
RefSeq - NM_200965
RefSeq - XM_021478220
RefSeq Peptide - NP_957259
swissprot - A9C3Q4
swissprot - E9QEP4
swissprot - A9C3Q5
ZFIN ID - ZDB-GENE-040426-702
Ensembl - ENSDARG00000029439
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATP2A2ENSGALG00000032287Gallus gallus
 ATP2A2ENSG00000174437Homo sapiens
 Atp2a2ENSMUSG00000029467Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atp2a2a / atp2a2b / ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a / ATP2A2* / O55143* / P16615* / Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 * / ATPase sarcoplasmi...ENSDARG0000000512288
atp2a1 / ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1ENSDARG0000002057484
atp2a3 / ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 / Q64518* / Q93084* / Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 *ENSDARG0000006097881
atp2a1l / ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, likeENSDARG0000003545881
si:dkey-28b4.8ENSDARG0000000284079
atp2c1 / ATPase secretory pathway Ca2+ transporting 1 / P98194* / Q80XR2* / Calcium-transporting ATPase type 2C member 1 *ENSDARG0000006019731
atp1a1a.2 / ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 / ATP1A1* / P05023* / Q8VDN2* / ATPase Na+/K+ transporting subunit alpha 1* / Sodium/potassium-transporting ATPas...ENSDARG0000000773929
atp1a3b / ATPase Na+/K+ transporting subunit alpha 3b / P13637* / ATP1A3* / Q6PIC6* / AC010616.2* / ATPase Na+/K+ transporting subunit alpha 3* / Sodium/potassium-transporting ATPase subuni...ENSDARG0000010413929
atp1a3a / ATPase Na+/K+ transporting subunit alpha 3a / P13637* / ATP1A3* / Q6PIC6* / AC010616.2* / ATPase Na+/K+ transporting subunit alpha 3* / Sodium/potassium-transporting ATPase subuni...ENSDARG0000001825929
atp1a1a.4 / ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 / ATP1A1* / P05023* / Q8VDN2* / ATPase Na+/K+ transporting subunit alpha 1* / Sodium/potassium-transporting ATPas...ENSDARG0000000187029
atp1a1a.1 / ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 1 / ATP1A1* / P05023* / Q8VDN2* / ATPase Na+/K+ transporting subunit alpha 1* / Sodium/potassium-transporting ATPas...ENSDARG0000000279129
atp1a1a.5 / ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 5 / ATP1A1* / P05023* / Q8VDN2* / ATPase Na+/K+ transporting subunit alpha 1* / Sodium/potassium-transporting ATPas...ENSDARG0000004025229
atp1a1a.3 / ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 / ATP1A1* / P05023* / Q8VDN2* / ATPase Na+/K+ transporting subunit alpha 1* / Sodium/potassium-transporting ATPas...ENSDARG0000003913129
atp1a1b / ATPase Na+/K+ transporting subunit alpha 1b / ATP1A1* / P05023* / Q8VDN2* / ATPase Na+/K+ transporting subunit alpha 1* / Sodium/potassium-transporting ATPase subunit alpha-1 *ENSDARG0000001985628
atp1a2a / ATPase Na+/K+ transporting subunit alpha 2 / ATP1A2* / P50993* / Q6PIE5* / Sodium/potassium-transporting ATPase subunit alpha-2 *ENSDARG0000001047228


Protein motifs (from Interpro)
Interpro ID Name
 IPR001757  P-type ATPase
 IPR004014  Cation-transporting P-type ATPase, N-terminal
 IPR005782  P-type ATPase, subfamily IIA, SERCA-type
 IPR006068  Cation-transporting P-type ATPase, C-terminal
 IPR008250  P-type ATPase, A domain superfamily
 IPR018303  P-type ATPase, phosphorylation site
 IPR023214  HAD superfamily
 IPR023298  P-type ATPase, transmembrane domain superfamily
 IPR023299  P-type ATPase, cytoplasmic domain N


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0008016 regulation of heart contraction IMP
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0099132 ATP hydrolysis coupled cation transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005388 calcium-transporting ATPase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Reduction of cytosolic Ca++ levels
Ion homeostasis
Ion transport by P-type ATPases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr