ENSDARG00000030087


Danio rerio

Features
Gene ID: ENSDARG00000030087
  
Biological name :nfkbib
  
Synonyms : nfkbib / nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
  
Possible biological names infered from orthology : NF-kappa-B inhibitor beta / NFKB inhibitor beta / Q15653 / Q60778
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 37032038
Gene end: 37038083
  
Corresponding Affymetrix probe sets: Dr.5973.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000045035
Ensembl peptide - ENSDARP00000135115
NCBI entrez gene - 797834     See in Manteia.
RefSeq - NM_001128795
RefSeq Peptide - NP_001122267
swissprot - B3DJC4
swissprot - A0A0R4IK66
ZFIN ID - ZDB-GENE-070705-529
Ensembl - ENSDARG00000030087
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFKBIBENSGALG00000029691Gallus gallus
 NFKBIBENSG00000104825Homo sapiens
 NfkbibENSMUSG00000030595Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfkbiab / nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b / Q9Z1E3* / NFKBIA* / P25963* / NFKB inhibitor alpha* / NF-kappa-B inhibitor alpha *ENSDARG0000000769324
nfkbie / nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon / O00221* / NFKB inhibitor epsilon*ENSDARG0000006836723
nfkbiaa / nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a / Q9Z1E3* / NFKBIA* / P25963* / NFKB inhibitor alpha* / NF-kappa-B inhibitor alpha *ENSDARG0000000548123
bcl3 / B cell CLL/lymphoma 3 / P20749* / Q9Z2F6* / B-cell lymphoma 3 protein homolog *ENSDARG0000008783221
nfkbiz / nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta / Q9BYH8* / Q9EST8* / NFKB inhibitor zeta* / NF-kappa-B inhibitor zeta *ENSDARG0000010209716
zgc:113279ENSDARG0000009953312


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Activation of NF-kappaB in B cells
RIP-mediated NFkB activation via ZBP1
TAK1 activates NFkB by phosphorylation and activation of IKKs complex
TRAF6 mediated NF-kB activation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000017037 ikbkg / inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma / Q9Y6K9* / O88522* / NF-kappa-B essential modulator * / inhibitor of nuclear factor kappa B kinase subunit gamma*  / reaction
 ENSDARG00000105261 nfkb1 / nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 / P25799* / P19838* / nuclear factor kappa B subunit 1* / Nuclear factor NF-kappa-B p105 subunit Nuclear factor ...  / complex
 ENSDARG00000098696 rela / v-rel avian reticuloendotheliosis viral oncogene homolog A / Q04206* / RELA proto-oncogene, NF-kB subunit*  / complex
 ENSDARG00000104806 fbxw11a / F-box and WD repeat domain containing 11a / FBXW11* / Q9UKB1* / F-box and WD repeat domain containing 11*  / complex / reaction
 ENSDARG00000055276 rel / v-rel avian reticuloendotheliosis viral oncogene homolog / Q04864* / reticuloendotheliosis oncogene* / REL proto-oncogene, NF-kB subunit*  / complex
 ENSDARG00000017230 fbxw11b / F-box and WD repeat domain containing 11b / Q9UKB1* / FBXW11* / Q5SRY7* / F-box/WD repeat-containing protein 11 * / F-box and WD repeat domain containing 11*  / reaction / complex
 ENSDARG00000003151 skp1 / S-phase kinase-associated protein 1 / Skp1a* / P63208* / Q9WTX5* / AC104109.3* / S-phase kinase-associated protein 1A*  / complex / reaction
 ENSDARG00000019239 cul1a / cullin 1a / CUL1* / Q13616* / Q9WTX6* / cullin 1* / Mus musculus cullin 1 (Cul1), transcript variant 3, mRNA.*  / complex / reaction
 ENSDARG00000038687 nfkb2 / nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) / Q00653* / Q9WTK5* / nuclear factor kappa B subunit 2*  / complex
 ENSDARG00000079123 ikbkb / inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta / O14920* / inhibitor of kappaB kinase beta* / inhibitor of nuclear factor kappa B kinase subunit beta*  / reaction






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr