ENSDARG00000032327


Danio rerio

Features
Gene ID: ENSDARG00000032327
  
Biological name :usp36
  
Synonyms : ubiquitin specific peptidase 36 / usp36
  
Possible biological names infered from orthology : B1AQJ2 / Q9P275
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 57583656
Gene end: 57630791
  
Corresponding Affymetrix probe sets: Dr.10523.1.A1_at (Zebrafish Array)   Dr.5491.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111119
NCBI entrez gene - 327239     See in Manteia.
RefSeq - NM_001305580
RefSeq Peptide - NP_001292509
swissprot - E7F4C0
ZFIN ID - ZDB-GENE-030131-5450
Ensembl - ENSDARG00000032327
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USP36ENSGALG00000037018Gallus gallus
 USP36ENSG00000055483Homo sapiens
 Usp36ENSMUSG00000033909Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usp42 / ubiquitin specific peptidase 42 / B2RQC2* / Q9H9J4*ENSDARG0000007730027
usp22 / A6H8I0 / ubiquitin specific peptidase 22 / USP51* / Q70EK9* / Q8CEG8* / Q9UPT9* / B1AY15* / Q5DU02* / A6NNY8* / USP27X* / ubiquitin specific protease 51* / ubiquitin specific peptid...ENSDARG0000004040710
usp3 / ubiquitin specific peptidase 3 / Q91W36* / Q9Y6I4*ENSDARG0000004564110
usp44 / ubiquitin specific peptidase 44 / Q9H0E7*ENSDARG0000008986110
usp49 / ubiquitin specific peptidase 49 / Q6P9L4* / Q70CQ1*ENSDARG0000000022910


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:1904888 cranial skeletal system development IMP
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk deformed , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
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 ZFA:0001115 trunk trunk immature , abnormal
trunk decreased thickness , abnormal
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 ZFA:0001117 post-vent region post-vent region curled , abnormal
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 ZFA:0001205 Meckel s cartilage Meckels cartilage morphology , abnormal
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 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton decreased size , abnormal
Show

 ZFA:0001460 pharyngeal arch cartilage pharyngeal arch cartilage malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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